Xanthomonas hydrangeae: LMG31886_39560
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Entry
LMG31886_39560 CDS
T07925
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMG31886_39560 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhd03400
]
LMG31886_39560 (priA)
Enzymes [BR:
xhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMG31886_39560 (priA)
DNA repair and recombination proteins [BR:
xhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMG31886_39560 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
SH3_16
Motif
Other DBs
NCBI-ProteinID:
CAD7745825
LinkDB
All DBs
Position
LMG31886:4606770..4608992
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AA seq
740 aa
AA seq
DB search
MSSTVATLRVALPVPLPQLFDYLPPADAPLTDPARVGCRVRVPFGPRELVGVVVDIGQLA
SAEGLRPALAWCDDAPLLVDELARSLQWLARYTHAPLGEAQASALPGPLRRGEPLADTHA
WAWQLTEAGRTGATGLRTGSRPALLAALLLAGAVGEEQLDPLLPEWRQAARSLAKRDYVE
RVAVPADAIPPRPGTGPQLNDEQQAAASAVRAHTGFATYLLDGVTGSGKTEVYLQAIADC
LAAGRQALVLVPEIGLTPQTLGRFRARLGVPVHALHSGLFDGERARVWAAAWRGEAKLIV
GTRSAIFIPLPKAGLIVVDEEHDGSYKQQDGIRYHARDFALVRGKALDVPVILGSATPSL
ESLHNAYSGRYQHLRLSRRAGEARPPRVRVLDVRKRPLKDGLSPEVLAGIGATLARGEQV
LVFKNRRGYAPVLLCHDCGWTAACQRCSTPLHQTPMTVHAGGRRLQCHHCGARQSAPLAC
PACASLALQPQGIGTERLEERLTEAFPEFPVVRIDRSTTQRRDALETQLARLGTEAGILV
GTQILAKGHDLPRLTMVVVVGIDEGLFSADFRAAEKLSQQLIQVAGRAGRADRPGEVWLQ
THHPEHPLLQTLVNGGYHAFADAELQQREAAGFPPFAHLALFRAEAKDVAAANQFLMAVR
GLTTSDTTTQSPAFAAVECYGPMPAPMPRRAGFQRTQLLLSAQQRSALHRLLDAQLPAIY
ALPQARRVRWSLDVDPIDLY
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgaccgtcgccaccctgcgtgtcgccttgccggtgccgctgccccagttgttc
gactatctgcccccggccgatgccccgctgaccgatccggcgcgggtcggctgccgggtg
cgggtgccgttcgggccgcgcgaactggtcggagtggtagtggacatcgggcaattggcc
tcggccgaggggctacgccccgccttggcctggtgcgacgatgccccgctgctggtcgac
gaactggcccgctcgctgcagtggctggcgcgctacacccacgccccgcttggcgaagcc
caggccagcgccctgcccggcccgttgcggcgtggcgagccgctggccgacacccatgcc
tgggcctggcagctgaccgaggccgggcgcaccggcgccaccggtttgcgcacgggtagc
cggccggcgctgctggcggccctgctgctggccggtgcggtgggtgaagaacagctcgac
ccgttgctgccggaatggcggcaggccgcgcgcagcctggccaagcgcgactatgtcgag
cgcgtggcggtgcccgccgacgccatcccgccgcgccccggcactggcccgcagctcaac
gacgagcaacaggcagccgcctctgccgtccgcgcgcacaccggctttgccacctatctg
ctcgatggcgtcaccggcagcggcaagaccgaggtctatctgcaggcgatcgccgattgc
cttgccgccggacgccaggcgctggtgctggtgccggaaatcggcctgaccccgcaaacg
ctgggccgcttccgcgcccgcctgggcgtgccggtgcacgcgctgcactccggcctgttc
gatggggaacgcgcccgcgtgtgggcggccgcctggcgtggcgaggcaaaactgatcgtc
ggcacccgctcggcgatcttcattccgctgcccaaggccggcctgatcgtggtcgatgaa
gaacacgacggcagctacaagcagcaggacggcatccgctaccacgcccgcgatttcgcg
ctggtgcgcggcaaggcgctggatgtgccggtgattctgggtagcgcaacgccatcgctg
gaaagcctgcacaacgcctattccggccgctaccagcatctgcgcctgtcgcgtcgggcc
ggcgaggcgcgtccgccacgcgtgcgcgtgctcgacgtgcgcaagcgcccgctcaaggac
ggcctgtcgccggaggtgcttgccggtatcggcgccaccctggcgcgcggcgagcaggtg
ctggtgttcaagaaccgccgcggctacgcgccggtgctgctgtgtcacgactgcggctgg
accgccgcctgccaacgctgcagcacgccgctgcaccagaccccgatgaccgtgcacgcc
ggcggccgacgcctgcaatgccatcactgcggcgcgcgccaatccgcaccgctggcctgc
ccggcctgcgccagtctggcgctgcagccgcaaggcatcggcaccgagcggctggaagaa
cgcctgaccgaggcgttcccggagtttccggtggtgcgtatcgatcgcagcaccacccag
cgccgcgatgccctggaaacccaactcgcccggctcggtaccgaagccggcatcctggtc
ggcacccagatcctggccaagggccacgacctgccacggctgaccatggtggtggtggtc
ggcatcgacgaaggcctgttttcggccgatttccgcgccgcagagaaactctcccagcag
ctgatccaggtggcaggacgcgccgggcgtgccgaccgccccggcgaggtctggttacag
acccaccacccggaacatcccttgctgcagaccctggtcaacggcggctaccacgccttt
gctgatgccgaactgcagcagcgcgaggccgctggatttccacccttcgcgcatctggcg
ctgttccgcgccgaggccaaggatgtggcggccgccaatcagtttttgatggcagtgcgt
ggattgaccacgtcagacaccacgacgcaatcgcccgcgtttgccgcagtggaatgctac
ggcccgatgcccgcaccgatgccgcgccgcgccggtttccagcgaacccagttgttgttg
tccgcgcaacagcgttcggccctgcatcgtctgctggacgcgcagttgcctgcgatctat
gcgctaccgcaggcgcgtcgcgtgcgctggtcgctggatgtggatccgatcgatctgtat
tag
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integrated database retrieval system
