Xanthomonas hydrangeae: LMG31886_39620
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Entry
LMG31886_39620 CDS
T07925
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
xhd
Xanthomonas hydrangeae
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhd03021
]
LMG31886_39620 (rpoH)
Transcription machinery [BR:
xhd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LMG31886_39620 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
HTH_11
IF2_N
KORA
HTH_10
UCR_14kD
HTH_3
YoqH
HTH_25
Motif
Other DBs
NCBI-ProteinID:
CAD7745861
LinkDB
All DBs
Position
LMG31886:complement(4613511..4614386)
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AA seq
291 aa
AA seq
DB search
MNQTTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQNLARRFRDELDLDAAREL
VHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPEMGVRLVSFAVHWIRAEM
HEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWLNASEVTAVAKDLNVSEREVMEMES
RLSGRDIGFDASSDEDDDHGPPSPVSYLVANEEDPSQAYERHDSEDNQLQLLREGLSGLD
TRSRDIVKRRWLDSDSKVTLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagactacctcgactgccctcgtggcaaacaatctcccgattcccagtgcgctc
ggttcgctggacgcctacatcggtgccgtgcaccagatcccggtgctgtcggtcgatgag
gaacagaatctcgcccgtcgtttccgcgacgagctggatctggacgccgcgcgcgaactg
gtccattcccacctgcgcttcgtggtccacgtggcccgcggctacaacggctacggcctg
ccgctgggcgacctgatccaggaaggcaacatcggcctgatgaaggcggtcaagcgcttc
gatccggaaatgggtgtgcgcctggtcagcttcgcagtgcactggatccgtgccgaaatg
cacgagttcatcctgaagaactggcgcatcgtcaaggtcgccacgaccaaggcgcagcgc
aagctgtttttcaacctgcgcaagtccaagacccgcctgggctggctcaatgcctccgaa
gtgactgcggtcgccaaggacctgaacgtctccgagcgcgaagtgatggagatggagtcg
cgtctgtccggtcgcgatatcggcttcgatgcttcgtccgatgaggacgacgatcatggc
ccgccgtcgccggtgagctacctggtcgccaatgaggaagatccgtcgcaggcctacgag
cgtcacgatagcgaagacaaccagctgcagctgttgcgcgaagggctgtccggtctggat
acgcgttcgcgcgacatcgtcaagcgtcgctggctggattccgattccaaggtgacgttg
caggagttggcagacgagtacggcgtgtcggccgagcggattcgccagatcgaggcgaac
gcgctgaagaagatgaaggcactgttcgtcgcctga
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