Xanthomonas hydrangeae: LMG31886_40700
Help
Entry
LMG31886_40700 CDS
T07925
Symbol
pdeB
Name
(GenBank) putative cyclic di-GMP phosphodiesterase PdeB
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
xhd
Xanthomonas hydrangeae
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LMG31886_40700 (pdeB)
Enzymes [BR:
xhd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LMG31886_40700 (pdeB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
Motif
Other DBs
NCBI-ProteinID:
CAD7746407
LinkDB
All DBs
Position
LMG31886:4745726..4747288
Genome browser
AA seq
520 aa
AA seq
DB search
MKRQRIISVTVLLVVLCATLPISLSYYLAWRLALDREQSRLSQLAALSIRRTEAAFDEAH
GALVNMAGSQLPRCSPEHLAQMRALVLTSHYIVELGHFQQRRLRCTSWGPLPEAIPQSTP
DFVVKRGIAVTTRLRPLANPQHPLMALQLDDYNVLINPATLTDINIPPGLQLAIGTPSGQ
ILSSTNTAAEQLLIEPLPDTSSADATQTQVLSGRDRRGDWAAVVTEPVAYLRGPLAAARL
QTVPVGIALALLLVSLVIWVSRRRLSPLARLESAVQRGEFVVHYQPIIALDSGACVGAEA
LVRWQQSDGVLIPPDAFIPLAEESGLILPITDMVVAEVIRELGPTLAAIPSLHVAINVSA
GDIKSGRVQTVLAQALRGTGVDSGQLWVEATERSLMDIDAARATITHLRGAGHTVSIDDF
GTGYSSLQYLQGLPLDALKIDKSFVDTIGTHSATSAVTSHIIDMAKTLKLRTIAEGVERQ
EQLDYLRAHGVDLAQGWLFSRALPATGFIAYHALMRNTTH
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgacaacgcatcatcagtgtgaccgtgttgctggtggtgctatgcgcaaccctt
ccgatcagcctgtcctattacctggcgtggcggctggcgctggatcgcgagcagagcagg
ctcagccagctggcggcgctgtcgatccggcgcaccgaagccgccttcgacgaagcgcac
ggcgcgctggtgaacatggccggctcgcagctgccgcgctgttcccctgagcatctggcg
cagatgcgcgcattggtgctgaccagtcattacatcgtggagctggggcattttcagcag
cgccgtttgcgctgcacttcgtgggggccgttgccagaggccattccacagtcaacgccg
gatttcgtggtcaagcgcggcattgcggtgaccacccgcctgcgtccgctggccaatcct
cagcacccgctgatggcgctgcagctggacgactacaacgtgttgatcaatccggccacc
ctcaccgacatcaatatcccgcccggcctgcaactggcgatcggcaccccgagcgggcag
atcctgagcagtaccaataccgccgccgagcaattgttgatcgagccgttacccgataca
tccagcgcagacgcaacgcagacgcaggtcttgtccggccgcgaccgccgtggcgactgg
gctgcggtggtcaccgagccggtcgcttacctgcgtggcccgctggcagcggcacgcctg
cagacagtgccggtgggcatcgcattggcgctgctgctggtcagcctggtgatctgggtt
tcacggcggaggctgtcgcccttggcacggctggaaagcgccgtgcaacgcggcgaattc
gtcgtgcactaccagccgatcatcgcgctcgacagcggtgcctgcgtcggtgccgaggcg
ctggtgcgctggcagcaatccgatggcgtgctgatcccgcccgatgcctttatcccgctg
gccgaagaaagcggtctgatcctgccgatcaccgacatggtggtggcagaagtcatccgc
gaactcggcccgacactggcggcgattccgtccctgcatgtggccatcaacgtctcggcc
ggcgacatcaagagcggccgcgtgcagaccgtgctggcgcaagcactgcgcggcactggc
gtggacagcggacagctgtgggtggaggccaccgagcgcagcctgatggatatcgatgcg
gcacgcgccaccatcacccatctgcgcggtgccggccacacggtgtcgatcgacgacttc
ggcactggctactcgagcctgcagtacctgcaagggctgccgctggatgcattgaagatc
gacaagtcgttcgtggacaccattggcacccactcggctaccagtgcggtgacctcgcac
atcatcgacatggccaagacgctgaagttgcgcaccatcgccgaaggcgtggagcgccag
gagcagctggactatctgcgtgcgcatggcgtggatctggcgcaaggctggctgttctcg
cgcgcactgccggccactggtttcatcgcatatcacgcgctgatgcgcaacaccacacac
tga
DBGET
integrated database retrieval system
