Xanthomonas hydrangeae: LMG31886_42430
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Entry
LMG31886_42430 CDS
T07925
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd03420
Nucleotide excision repair
xhd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMG31886_42430 (uvrD)
03430 Mismatch repair
LMG31886_42430 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhd03400
]
LMG31886_42430 (uvrD)
Enzymes [BR:
xhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMG31886_42430 (uvrD)
DNA repair and recombination proteins [BR:
xhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMG31886_42430 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LMG31886_42430 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
InPase
DUF6825
Motif
Other DBs
NCBI-ProteinID:
CAD7747079
LinkDB
All DBs
Position
LMG31886:complement(4933663..4935834)
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AA seq
723 aa
AA seq
DB search
MLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAVTFTNK
AAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQLRLVKR
VVQSLELDEGKYPPKQMSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQERCDRS
GLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGETGHVF
VVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAHNPDRI
GKQLWTDSGDGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQSRALE
EALISEQLPYRVYGGMRFFERAEIKDALAYLRLLSNRSDDAAFERAVNTPTRGIGDRTLD
EVRRLARANALSLWEAAMLCTQENTLAARARNALATFLSLVGQLQAETGDMELAERIDHV
LMRSGLREHWAKESRSGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFLAYASL
EAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEERRLAY
VGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLHEVRPKVQVSRTASLGAAR
GGPVHGVVEAAPIKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVMAYANL
TVM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgatcatttaaaccccgcccagcgcgaggccgtttccgcgccgccggggcattac
ctggtgctggccggcgccggctccggcaagacgcgcgtgctgatccatcgcatcgcctgg
ctcaacgaagtccagggcgtgcctaaccacggcatcttcgcggtgaccttcaccaacaag
gccgccggggaaatgcgccaccgcaccgacctgcagctgcgtaacggcagccgcgggatg
tggatcggcaccttccatgggctggcccatcggctgctgcggctgcactggcaggacgcg
cggctgccggaaggcttccaggtcatggacagcgacgaccagctgcggctggtcaagcgc
gtggtgcagtcgctggagctggacgagggcaagtacccgcccaagcagatgagctggtgg
atcaacgagcagaaggacgaaggtcggcgtccgcagcatatccagcccgagcccaacgac
gactggaccgaggtgcgccgtcaggtgtacgcggcctaccaggaacgttgcgaccgctcc
ggcctgctggatttcgccgagttgctgctgcgcgcgcacgaactgctgcgcgacaccccg
gccttgctggcgcattaccgcgcgcgctttcgcgagatcctggtcgacgagttccaggac
accaatgccatccagtacgccttcgtgcgcgtgctggccggcgagaccggccacgtgttc
gtggtgggcgacgacgaccaggccatctatggctggcgcggtgccaaggtcgagaacgtg
cagcgcttcttgaaggacttccccggcgcgcagaccgtgcggctggagcagaattaccgc
tccagcgcgaatattctgggcgcggccaatgcggtgatcgcgcacaacccggaccgcatc
ggcaagcagttgtggaccgattccggcgatggcgacccgatcgatttgtatgcggcctac
aacgaagtcgacgaggcgcgctatgtggtcgagcgtgcgcggcagtgggtgcgagatggt
ggcagctacggtgaagtggcggtgctctatcgcagcaacgcgcaatcgcgcgcgctggaa
gaagcgctgatttccgagcagctgccgtaccgcgtgtatggcggcatgcgcttcttcgaa
cgcgccgaaatcaaggatgcgctggcctatttgcgcctgctcagcaaccgcagcgacgat
gccgccttcgagcgcgcggtcaacacgcctacgcgcggcatcggcgatcgcacgctggac
gaagtgcgccggctggcgcgcgccaatgcgctgtcgctgtgggaagcggcgatgctgtgc
acgcaggaaaacaccctggccgcacgcgcccgcaatgcgctggctacgttcctgagcctg
gtcggccaactgcaggctgaaaccggcgacatggaactggccgagcgcatcgaccatgtg
ctgatgcgctccggcctgcgcgagcactgggccaaggaaagccgcagcgggctggattcg
gaatcgcgcaccgagaacctggacgagctggtctcggtcgcctcgcgcttcacccgcccg
gacgacgaagacagccagggcatgaccgagctggtcgccttccttgcttacgcctcactg
gaagccggcgaaggccaggcgcaggcgggcgaagaaggcgtgcagctgatgacgctgcat
tcggccaagggcctggaatttccgatcgtgtttctggtcggcctggaagatggcttgttt
ccgagtgcgcgctcgctggaagaaagcgggcgtctggaagaagagcgtcgcctggcgtac
gtaggcatcacccgcgcgcgccagaagctggtgctgtgttacgccgaatcgcggcgcatc
catggtcaggacaactacaacgtgccctcgcgcttcctgcgcgagatcccgcgcgacctg
ctgcacgaagtgcgcccgaaagtgcaggtctcgcgcaccgcctcgctgggcgcggcacgc
ggcggaccggtgcacggcgtggtcgaagccgcgccgatcaagctcggcgccaatgtcgaa
catcccaagttcggcggcggcgtggtcgtggattacgagggcgccggtgcacacgcgcgc
gtgcaggtgcagttcgacgaagtcggcgccaagtggctggtgatggcgtatgccaatttg
acggtgatgtag
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