Xanthomonas hydrangeae: LMG31886_43830
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Entry
LMG31886_43830 CDS
T07925
Symbol
mutM_2
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMG31886_43830 (mutM_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhd03400
]
LMG31886_43830 (mutM_2)
Enzymes [BR:
xhd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LMG31886_43830 (mutM_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LMG31886_43830 (mutM_2)
DNA repair and recombination proteins [BR:
xhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMG31886_43830 (mutM_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
CAD7747611
LinkDB
All DBs
Position
LMG31886:complement(5117489..5118304)
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AA seq
271 aa
AA seq
DB search
MPELPEVETTLRGLAPHLVDQRIHGVILRRPDLRWPIPEQIERLLPGATMTNVRRRAKYL
LIDTDAGGSALLHLGMSGSLRVLPGDTLPRAHDHVDISLENGRVLRFNDPRRFGCLLWQS
DTQVHELLAALGPEPLSDAFTGDYLHALARGRRAAVKTFLMDQAVVVGVGNIYAAESLHR
AGISPLREAGKVSLDRYRRLATAVKDILGYAIQRGGTTLRDFISPDGAPGYFEQELTVYG
REGEACKQCGRALKHATIGQRATVWCSSCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttcccgaagtcgaaaccaccttgcgcggcctggccccgcatctggttgac
caacggattcatggcgtcatcctgcgacgaccggatctgcgctggccgattcccgagcag
atcgagcggctgcttcctggcgccaccatgaccaacgtgcggcgtcgcgccaagtatcta
ttgatcgataccgatgctggcggcagtgcgttgctgcatcttggaatgtccggaagtctg
cgcgtgttgcctggcgatacattgccgcgtgcgcacgatcatgtggatatcagtttggaa
aatgggcgcgtgctgcgcttcaacgatccgcgccgattcggctgcctgttgtggcaatcc
gatacgcaggttcacgaattgcttgctgcacttggtcccgaaccattatcggatgcattt
actggcgattatctgcatgcactggcgcgtggccgtcgggctgcggtgaaaacctttctg
atggatcaagcggtcgtcgtcggcgtggggaatatttacgctgccgaaagcctgcatcgc
gcgggaatcagccccttgcgagaggctggaaaagtatctttggaccgctaccggcgcttg
gctacagcggtcaaagacattctgggatatgcgatccagcgcggaggtacgacgttgcgt
gatttcatcagcccggacggggcacccggttacttcgagcaggaactcacggtgtatggg
cgcgagggtgaagcctgcaagcagtgtggacgtgcgttgaaacacgccacgatcgggcaa
cgtgcgacagtgtggtgcagcagttgccagcgttga
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