Xanthomonas hydrangeae: LMG31886_43920
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Entry
LMG31886_43920 CDS
T07925
Symbol
tetA
Name
(GenBank) Tetracycline resistance protein, class C
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
xhd
Xanthomonas hydrangeae
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhd02000
]
LMG31886_43920 (tetA)
01504 Antimicrobial resistance genes [BR:
xhd01504
]
LMG31886_43920 (tetA)
Transporters [BR:
xhd02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
LMG31886_43920 (tetA)
Antimicrobial resistance genes [BR:
xhd01504
]
Gene variants
Tetracycline resistance genes
Transporters
LMG31886_43920 (tetA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_2
MFS_4
TRI12
Motif
Other DBs
NCBI-ProteinID:
CAD7747627
LinkDB
All DBs
Position
LMG31886:complement(5128537..5129796)
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AA seq
419 aa
AA seq
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MSISPDSASAPAPGRRRAALIFIFITVLIDVLSFGVIIPVLPDLVRHFTGGDYAVAAGWI
GWFGFLFAAIQFVCSPLQGTLSDRYGRRPVILLSCLGLGLDFILMAVAHSLPMLLLARVI
SGVCSASFSTANAYIADVTPADKRAGAFGMLGAAFGIGFVAGPLIGGWLGSIGLRWPFWF
AAGLALLNVLYGWFVLPESLPAQRRTARLDWSHANPLGALKLLRRYPQVFGLASVVFLAN
LAHYVYPSIFVLFASYQYHWGPREVSWVLAGVGVCSIIVNALLVGRLVRWLGERRALLLG
LGCGVIGFVIYGLADSGTAFLIGVPISAFWAIAAPSAQALITREVGADAQGRVQGALTSL
ISLAGIAGPLLFANVFAWFIGSGAPLHLPGAPWLLLAAGWVMAWKRAGRGPGIAHATPR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctctcccgattccgcatccgctcctgcaccgggccggcgccgcgccgcgctg
atcttcatcttcatcaccgtgctgatcgacgtgctgtccttcggcgtgatcattccggtg
ctgccggatctggtgcggcacttcaccggtggcgattacgccgtggccgccggctggatc
ggttggttcggctttctattcgccgccatccagttcgtctgctcgccgctgcagggcacc
ttgtccgaccgctacggccgccgcccggtgatcctgctctcgtgcctggggctgggcctg
gacttcatcctgatggcggtcgcgcattccctgccgatgctgctgctggcgcgggtgatc
tccggcgtatgctcggccagcttttccactgccaacgcctatatcgccgatgtcaccccg
gccgacaagcgtgccggcgcgttcggcatgctcggcgccgcgttcggcattggttttgtc
gccggcccgctgatcggcggctggctgggcagcatcggtctgcgctggccattctggttt
gccgcagggctggcgctgttgaacgtgttgtacggctggtttgtgctgcccgaatcgctg
cccgcccaacgtcgcaccgcgcggctggattggtcgcatgccaacccgcttggcgcgctc
aagttgctgcgtcgctacccgcaggtattcggcctggcctcggtggtgttcctggccaac
ctggcgcattacgtctaccccagcatcttcgtgctgttcgccagctaccagtatcactgg
ggcccgcgcgaagtgagctgggtgctggctggcgtgggtgtgtgcagcatcatcgtcaac
gcgttgctggtcggccggctggtgcgctggctgggcgaacgtcgcgcgctgttgctgggc
ctgggctgtggggtcatcggtttcgtcatctatgggctggccgacagcggcaccgcgttc
ctgatcggcgtgccgatcagcgcgttctgggcgatcgccgcaccgtccgcgcaggccttg
atcacccgcgaggtcggcgccgatgcgcaaggccgcgtgcagggcgcgttgaccagcctg
atcagtctggccggcatcgccggtccgttgttgttcgccaacgtgttcgcctggtttatc
ggcagcggcgccccgttgcatctgcccggcgcgccctggctcctgcttgccgcaggttgg
gtcatggcctggaagcgggcagggcgtgggcccggcatcgcgcacgcaacgccgcgataa
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