Xanthomonas hydrangeae: LMG31886_44360
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Entry
LMG31886_44360 CDS
T07925
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMG31886_44360 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhd03400
]
LMG31886_44360 (recC)
Enzymes [BR:
xhd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LMG31886_44360 (recC)
DNA repair and recombination proteins [BR:
xhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMG31886_44360 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CAD7747740
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All DBs
Position
LMG31886:complement(5179458..5182943)
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AA seq
1161 aa
AA seq
DB search
MGIGTDRCMQIFGKRRSKAASGTMHARMHATSAPDFRLYPSNALDTLAALLAQELRRPVP
EQPLLQPEVVLIPQVAMRRWLQSTLAAEHGVAANLEFLTPGEFVARALECNLGAAADDLD
MATTQWRLYAALQADLGSDAALAPLAGYLSDGDALKPWALAGELGNVFEKYQAWRRDWLL
RWEGGADPDDPQARLWRSIAAGRQYRARRIGQYLDRYARPDGPLPQGLPRRLFAFAILNI
SPDVLRVLATQARVGTLHFYLPTPTQGYWGDLQTLWQRRREDGAVQLFVEQVQENPLLQA
WGAAGRDFMALVGDYEVVHPLAEIAAYADPLESGRRALADGGLGDSLLRRMQSDLFHRRA
PSVPAVLPAVNLHDPSLQVHACHTRLRELQVLHDQLRALLDDARFDPPLQPREIAVLSPN
IDPYVPYLDAVFGSHGNDDALPYALADASPLASEPLAEVFLTLLGLPIARFGLHEILDLL
ASAPIAEAAGLDEAGLERLRGWLHAAGARWGLDAAHRRQHQAPSDDAYTWRFALDRLLLG
HASGADDDIEGVAPWPQLEGSAVAALDILLKLLRVLERHQSLLAEAMTPVEWRERLLGLL
EALIPKAPSAPRAQRALDRLRSLIDQFARDAVRADYAGTVPAEVVRAHFAAVLGESDTRA
PLLTGGISFGRMVPMRLLPFRAICLLGMNDGDFPRRDPAAGLNRLTAELGTERRRHGDRS
TREDDRFLFLQLFASAQEVFYLSYLGADARDGSAREPSVLVSELLGSAAQYHADPAAIDT
LVVHHPLQPFAAAAFGAPGDHGADPRRFSYRRQWRPSVDSLVGQRQPLAPWVAGALPADD
SAVPTSVSIDELRRLFADPAGQFLRHRLGMRLPDPAGEDSDLEPLLAPTRGLDQYGLQQH
VFDAALAGDTDRLYERLRARALLPSGPLGRRQLDERVAQLRPYAEAFRQWRGEAPAESRR
LQVQIGDVEVHGRVPGWYASGVGRVQVGALSGRSAIRHGLEWLLLRAAGELAPYVRFFED
EDGLGPHPIDPEPLSQTQAQSALAALLQVYRQGLQTPLAFAPYSSWKYHQAARSDDLDKA
IKDAAGQWQSSFGWSESHSPELRLVNRGRDPFADAQRFAEFATTSHRVYDLLERGNADAM
LDPQRLVDSWRQWHGAQEEAE
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcggcaccgatcgctgcatgcagatctttggcaaacggcgcagtaaggccgca
tccggcacaatgcacgcacgcatgcacgccacttccgcgcccgatttccgcctctatccc
tcgaacgcgctggatacgctggccgccttgctcgcacaggaactgcgcaggccggtgccg
gagcagccgttgctgcagccggaggtggtgctgatcccgcaggtggcgatgcggcgctgg
ctgcagtccacgctggcggccgagcatggcgtggcggcgaatctggaattcctcactccc
ggcgaattcgtcgcgcgcgcgctggagtgcaatctcggcgccgccgccgacgatctggac
atggccaccacgcagtggcggttgtacgccgcgttgcaggccgacctgggcagcgatgcg
gcgttagcgccgttggccggctatctgtccgacggcgatgcgctcaagccctgggcattg
gccggcgagctgggcaacgtgttcgagaagtaccaggcctggcgacgcgactggttgctg
cgctgggaaggcggcgccgaccccgatgatccgcaggcgcgcctgtggcgcagcatcgcc
gccgggcggcaataccgtgcgcgccgcatcggccagtacctggatcgctacgcgcgcccg
gatggtccgctgccgcagggcttgcccaggcgcctgttcgccttcgccatcttgaatatt
tcgcccgacgtactgcgcgtgctggccacgcaggcgcgcgtgggcacgctgcatttctat
ctgcccacgcccacgcaagggtactggggcgatctgcaaaccctgtggcaacgccgccgc
gaagacggtgcggtgcagctgtttgtcgagcaggtgcaggaaaacccgctgctgcaggcc
tggggcgcggccgggcgcgacttcatggcattggtcggcgactacgaggtggtgcacccg
ctggccgagatcgccgcctacgccgacccattggagtccggccgccgcgcactggccgac
ggcggcctgggcgacagcctgctgcggcgcatgcagagcgacctgttccatcgccgcgcg
cccagcgtgcctgcggtgttgccggcggtgaatctgcacgaccccagcctgcaggtgcac
gcctgccacacccgtctgcgcgagctgcaggtgctgcacgaccagctgcgcgccttgctc
gacgatgcgcgcttcgacccgccgctgcagccgcgcgagatcgcggtgctgtcgccaaat
atcgacccgtacgtgccgtacctggacgcggtgttcggcagccacggcaacgacgacgcg
ctgccgtacgcgctggccgatgccagcccgttggccagcgagccgctggccgaggtgttc
ctgaccttgctcggcctgccgatcgcacgcttcggtctgcacgagattctcgacctgctg
gccagcgcgccgatcgccgaggccgccggcctggacgaagccgggctggaacgcctgcgc
ggctggctgcacgcggccggcgcgcgctgggggctggatgcggcgcaccggcgtcagcac
caggcaccgagcgacgacgcctacacctggcgcttcgcgctggaccggctgctgctcggc
catgccagcggcgccgacgacgatatcgagggcgtggcgccctggccgcagctggaaggc
agcgcagtggccgcactcgatatcctgttgaagctgctgcgcgtgctcgaacgccaccaa
tctttattggccgaggcgatgacgccggtcgagtggcgcgagcgtctgctcggcctgttg
gaggcgttgattccgaaggcgccttcggcaccgcgtgcgcagcgcgcgctggaccgtttg
cgtagcttgatcgaccagttcgcccgcgatgcagtgcgtgccgactacgccggcaccgtg
ccggccgaggtggtgcgtgcgcacttcgctgcggtgcttggcgaatcggacacgcgcgcg
ccgctgctcaccggcggcatcagcttcggccgcatggtgccgatgcgcctgctgccattc
cgcgcgatctgcctgctcggtatgaacgatggcgacttcccgcgccgcgacccggccgcc
gggctcaatcgcctcactgccgagctaggcaccgagcgccgccggcatggcgaccgttca
acccgcgaggacgacaggttcctgttcctgcagttgttcgcctccgcgcaggaagtgttc
tacctgagctatctcggcgccgatgcgcgcgacggcagcgcgcgcgaaccgtcggtgctg
gtcagtgagttgctgggcagcgccgcgcagtaccacgccgacccggcggcaatcgacacg
ctggtggtgcaccacccgttgcagccgtttgccgccgctgccttcggtgcgccgggcgat
cacggcgccgacccgcgccgtttcagttatcgccgccaatggcggccgtcggtggacagc
ctggtcggccagcgccagccgctcgcgccatgggtggccggtgcgttgccggccgacgac
agcgcagtgccaaccagtgtctcgatcgacgagctacgccgcctgttcgctgacccggcc
gggcagtttctgcgccatcgtttgggcatgcgtctgcccgatccggccggcgaagacagc
gacctcgaaccgttgctcgcccccacgcgcggcttggaccaatacggcctgcagcagcat
gtgttcgacgccgcactggccggcgacaccgaccggctctacgagcgcctgcgcgcgcgc
gcgctgctgccgtccgggccgctggggcgacgccagctcgatgagcgggtggcgcaactg
cgtccgtatgccgaggcattccggcaatggcgtggcgaggcgccggctgagtcgcgccgg
ctgcaggtgcagatcggcgatgtcgaggtgcatggccgcgtgccgggttggtatgcgagc
ggggtagggcgggtgcaggtcggcgcactcagcggccgcagcgcgatccgccacggcctg
gaatggctgctgctgcgcgccgccggcgagctcgcgccgtatgtgcgcttcttcgaagac
gaagacggtttaggcccgcatcccatcgaccccgaaccgctgtcgcaaacgcaggcgcag
agcgcgttggccgcactgctgcaggtgtatcggcagggcttgcagacgccgctggcgttc
gcgccctacagcagctggaaataccaccaggccgcgcgcagcgacgatctggacaaggcc
atcaaggacgccgccgggcagtggcagtccagcttcggctggagcgaatcgcacagcccg
gaactgcgcctggtcaaccgcggccgcgacccgttcgccgacgcgcagcgcttcgccgag
ttcgccaccaccagccatcgtgtgtacgacctgctcgagcgcggcaacgccgacgccatg
ctcgatccgcagcgtctggtcgacagctggcgccagtggcacggcgcgcaggaggaggcc
gaatga
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