Xiphophorus hellerii (green swordtail): 116707496
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Entry
116707496 CDS
T07363
Name
(RefSeq) interferon regulatory factor 2-binding protein 1-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116707496
04121 Ubiquitin system [BR:
xhe04121
]
116707496
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116707496
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Atypical E3
116707496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
116707496
NCBI-ProteinID:
XP_032400756
LinkDB
All DBs
Position
18:3094958..3099027
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AA seq
453 aa
AA seq
DB search
MSSPSSSSRRQWCYLCDLPKMPWTVVWDFSEVVCRGCVNYEGANQIEFLIASARQLKRSH
GMQDGNVRSPGPSPNKHGSLARAEPLPDGGRQHAERFERGGRGEGGGTAIRVPPNGLHRD
GQPPHEVNRQSPSSSRRPMIGAAIPPNLVSQSIAGMPGLLAGMPAGLTARTAPMSSPMIF
PAPVLAEMSRRQLGIGISSFITPELERELISSQAKSQTQTQAGTSGSKSTSLSSSSFSMA
GGVSQTSPKPASSPARQQRPPTARSGAEPLGSGSSAEAATTAAALPNNGASELGSASVSN
THPTGNTLSCTLCHERLEDTHFVQCPSVPGHRFCFPCTRVYIQSRRGDGEVYCPSGERCP
LDNSPNSPPWAFMQGEVSTILGVVPAPAGSASAAASGASSGSGGAPASGSGSAAAGGASG
GGSGGGDVTVKKRERRDGDADRTAAAADLDSVQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccttcttcgtcgtccaggcgccagtggtgctacttgtgcgacctgccgaag
atgccatggaccgtggtgtgggacttcagcgaggtggtctgccgcggttgcgttaactac
gagggggctaaccagatcgagttcctgatagcaagcgcccgccagctgaagcggagtcac
ggcatgcaggacggcaacgtgaggtcgcccggcccttctcctaacaaacacggctcctta
gcaagagcagagccgctgccggacggcggaaggcagcacgctgagcgctttgagcgggga
gggagaggggaaggcggcggaacggcgatacgcgtgccgcccaacgggctccaccgcgac
ggacagccgccccatgaggtgaaccgccagagccccagcagcagccggagacccatgatc
ggagccgccatcccgcccaatctggtgtctcaaagcattgcgggaatgcctgggctgctt
gcgggcatgccagcgggtctgaccgccaggacagcgccgatgagcagcccgatgatcttc
ccggcgccggtgctggctgagatgagccgcagacagctggggatcggaatctcctccttc
atcactccggagctggagcgggagctcatttcctcccaggccaagtcccagactcagaca
caggctggcaccagtggtagcaagagcacaagcctgtcttcttcgtctttttccatggct
ggaggcgtgagccagacgagcccgaagcccgcttcatccccggccaggcagcaacgcccc
ccgacggcccggtccggagccgagcctctgggatccggcagctccgcggaggcagccacg
actgctgcggcgttacccaacaacggcgcctccgagctggggtcggcatctgtcagcaac
acccatccgaccggaaacacgctgtcctgcacgctgtgccacgagcggctggaggacaca
cactttgtccagtgtccatcagtgcctgggcacaggttctgcttcccctgcaccagagtg
tacatccagagccggcggggcgacggcgaggtgtactgccccagcggagagcgctgcccg
ctggataactcccccaacagcccgccctgggccttcatgcagggagaggtctccaccatc
ctgggcgtcgttccagctccagcgggatccgcgtcagcagcggcatccggagccagttcg
ggttcgggaggtgctccggcgtctggatcagggagcgcagcagcaggcggcgcaagtgga
ggtggatcaggaggaggagacgtcactgttaagaagagagagagacgtgatggtgacgcg
gaccgaacagcagcagcagcagatttggattcagtacaataa
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