Xiphophorus hellerii (green swordtail): 116707527
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Entry
116707527 CDS
T07363
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116707527 (rffl)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
116707527 (rffl)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
116707527 (rffl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
Prok-RING_4
MUG2_C
Phage_lysis
DUF6964
PARG_cat_microb
Motif
Other DBs
NCBI-GeneID:
116707527
NCBI-ProteinID:
XP_032400798
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Position
18:1795996..1801597
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AA seq
340 aa
AA seq
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MFACCCNWLCLDSTDVDPSGRADRRHQSYTNSAFNSQPSPPPPEHTCKACGGSFDTPARK
HVCVDCKKNYCSGCSAQQGLRPRLCHTCQRFYGNLLERAELMKLKVKELRDYLHLHEVST
HLCREKEELVELVLSQQSSPSGSSAPDTPTMTSDPPDPTPRISVSDSSSDASSPAPPTPE
PEAPPPDSETPPSDGELEEDDPAWDPEEAPVSGRRASLSDLKSVDDIEDLSVRQLKEILA
RNFVDYKGCCEKWELMERVTRLYQDQQNLLAANFVNAAGGGGGPAPGQEENLCKICMDSP
IDCVLLECGHMVTCTKCGKRMSECPICRQYVIRAVHVFRS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcctgctgctgtaactggctctgcctggactccacggatgtggacccgtcaggc
cgagctgacaggagacaccagtcctacaccaactcagccttcaactcccagccgtctccg
cctccacctgagcacacctgtaaggcgtgcggcggctccttcgacacacctgccaggaag
catgtgtgtgttgactgtaagaagaactactgcagcggctgctccgcccagcaggggctg
cggccgcgcctctgccacacctgtcagcgtttctatggcaacctgctggagcgggcggag
ctgatgaagctgaaggtgaaggagctgagggactacctgcacctacatgaggtctccacc
cacctgtgcagagagaaggaggagctggtggagctggtgctgagtcagcagtcgtcgcct
tccggcagctctgcccccgacacccccaccatgacctctgaccctcctgacccgacgcct
cgcatctccgtctctgattcgtcctctgacgcatcgagtccggccccgcccactccggag
cctgaagctccgcccccagactcagagactccgccctctgatggtgagctggaggaggat
gacccggcctgggacccggaggaggcgcccgtgtcggggcgacgggcctcgctgtcggac
ctgaaaagcgtggacgacatcgaggacctgagcgtccggcagctgaaggagattctggcc
cggaactttgtggattacaaaggctgctgtgagaagtgggagctgatggagcgcgtgacc
cggctgtaccaggaccagcagaacctgctggcggctaactttgtgaacgctgcaggtggc
ggcggcgggccggcgccgggccaggaggagaacctctgtaagatctgcatggactcgccc
atcgactgcgtcctgctggagtgcggtcacatggtcacctgcaccaagtgcggcaagcgg
atgagtgagtgtcccatctgccggcagtacgtgatccgggccgtgcacgtcttccggtcc
tga
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