Xiphophorus hellerii (green swordtail): 116707609
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Entry
116707609 CDS
T07363
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116707609
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116707609
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
ig
Ig_2
LRR_Zer-1
LRR_9
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
116707609
NCBI-ProteinID:
XP_032400919
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Position
2:complement(27132589..27299140)
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AA seq
639 aa
AA seq
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MSIRREWKRAIFGFPLLRRLVTDKMVAREATGHSYLVACWQPILILMLGTVLSGSTTGCP
SRCECNVPERSVMCHRKKLMTVPEGIPAETRLLDLSKNRIRTINPDEFANFPTLEHLELS
ENTISTIEPGAFNNLYGLRTLGLRSNKLKLIQLGVFTGLSNLTELDISENKIVILLDYMF
QDLYNLRSLEVGDNDLVFIAHRAFHGLNSLEHLSLEKCNLSSVPTEAFTHLHSLITLRLR
HLNINSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLNLTSLTIANTNLTTIPYVAL
QHLVYLRFLNLSYNPIHTIEGNKLHDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVS
GNSLTTLEESAFHSVGNLETLALYDNPLACDCRLLWVFRRRWRLNFNKQQPTCSSPEFVQ
GKEFKDFPDVLQPNYFTCRKSRIRDRKAQQKFVDEGAIVHFACQADGDPAPVIMWLSPQK
KFITSKTIGRLSVLPDGTLEVRYAQIQDNGTYVCIASNAGGNDTSLAHLHIHSYSPDWPH
QPNNSLAFISNQPTETRANGTKPNVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWS
RGKGNTKHNIEIEYVPRKSDAGMSSTTVDAPRKFNMKMI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccgccgtgaatggaaacgagcaatctttggatttcctctgttacggcgtttg
gtaaccgataagatggtggccagggaagcgactgggcacagctacctggtggcttgctgg
cagcccattctgatcctgatgctgggcaccgtgctttctggctccaccacgggatgtcca
tcccgctgtgagtgtaacgttccagagcgctcagtgatgtgccatcgtaagaagctcatg
accgttcccgagggcattccggcagaaacgagactgctggacctcagcaagaaccgcatc
agaacgattaacccagatgagtttgccaactttccgaccctggaacacctggagctcagc
gaaaacactatctccacaattgaacccggagcattcaataacctttatgggttacggaca
ctgggattgcgcagcaacaagctcaagttgatccagttgggtgtatttacgggcctgagc
aatctcaccgagctggacataagtgagaacaagattgtcatcctgttagactatatgttc
caggatttgtacaaccttcgctctttagaggtgggtgataacgatctggttttcatcgct
caccgtgcttttcacggccttaacagcctcgagcacctgagtcttgagaagtgtaacttg
tcttctgtgccaacagaggcttttacccacctccatagtttgatcactctcaggctgcgt
cacctcaacatcaattccatacgggattactcttttaaacggctatatcggctgaaagtg
ctggaaatagctaattggccatacctggataccatgaccacaaattgtttgtatggatta
aatctcacctctctgaccattgccaacaccaacctgaccacgatcccttatgtagcttta
cagcacttggtttatttgcgatttcttaatctttcatacaaccccatccataccatagag
ggaaataagctgcatgaccttctgcgtctacaggagtttcacctggttggagggagacta
gcaatgattgagccctactctttccgaggactaaactacctgaaaatactaaatgtgtct
ggaaactctcttaccactttggaggagtcagctttccattcggttggaaacctagaaacc
ctggccttgtacgataatcccctggcctgcgattgccgactcttgtgggttttccgaagg
cgatggagactgaacttcaacaagcaacagcccacctgctcctctcccgagttcgtccaa
ggcaaagagtttaaggacttcccagatgttctgcagccaaattacttcacgtgtcgcaag
tccaggattagggatcgtaaagcccagcagaaatttgttgacgaaggagccattgttcat
tttgcttgccaagcagacggagatcccgctccagtgattatgtggctttctcctcagaaa
aagtttatcacctccaagacaattggaaggctctctgtgttgccagatggcacccttgag
gtgcgctatgcgcagattcaagataacggtacctacgtatgcatagccagcaacgccggg
ggaaatgacacctctcttgctcacctacacattcatagttactcaccggactggccccac
caacctaacaacagtcttgctttcatatccaaccaacccactgagactcgtgctaacggt
acaaagcccaatgtccctttcccatttgatataaagacactaatcattgcaaccacaatg
ggtttcatctcttttcttggtgtcgtcctgttttgtctggtactgctattcctctggagc
agaggtaaaggcaacacaaagcacaacatcgagatcgagtatgtcccacgcaaatcggac
gctgggatgagcagcaccacagtggacgctcctcgcaagttcaatatgaaaatgatttaa
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