Xiphophorus hellerii (green swordtail): 116707721 Help Entry 116707721         CDS       T07363                                  Name (RefSeq) protocadherin-16-like   KO K16507   protocadherin-16/23 Organism xhe  Xiphophorus hellerii (green swordtail) Brite KEGG Orthology (KO) [BR:xhe00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:xhe04515]     116707721 Cell adhesion molecules [BR:xhe04515]  Cadherins   Cadherin related    116707721 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_2 Cadherin_pro CADH_Y-type_LIR Psg1 Motif Other DBs NCBI-GeneID:  116707721 NCBI-ProteinID:  XP_032401094 LinkDB All DBs Position 18:8921954..9017306 Genome browser AA seq 3280 aa AA seqDB search MKTAAKGFGKFKMDPLHSDGWFSRRIVLIVYVALELLTLHSSFVFGTLELQLDEEQPAGT VVGDISAGLPPGVTASLYFISDHEGTGVGSDLDIDESTGIIKTAKVLDRELRDRYSFIAV TMTGVTVEVTINVNDINDHAPKFPRKRVTFKIPEQTAIGTRFPLEPAVDSDKGQFTTQGY LIKDGNVGQAFTLETRRGSSEVLFLDLVVNGILDREKRSTYTLSLEAFDGGSPKRTDQIT LDIIVQDINDNAPVFNQSRYHAIISENLQPGSNILQVFATDADEGDNGLVLYEINRRQSD PDRYFVVDTRSGIITLNKPLDFEMRRVHELVVQAQDNATHPEVTNAFVTIHVRDYNDNQP TMTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFGLTTKDSI IYLVCVDQILDREERDTYELRVMATDSGTPPLRAESSFVIQVTDINDNPPLFDQPVYRQV IPEVVFPGSFVLQVTARDKDQGPNGDINYSILQDPSGYYSWFSIDSITGIITTLSQLDYE KNPSPSITVVATDGGKPPLSSTSVVNILLQDINDNEPVFEKNFYNVSIKENTAPGTCILQ VTATDADGGSFGSVSYSLGSGSNSAVPSHFTIGKQTGQICINAPLDRDQGPDSFDFTVTA VDGGGLSSVAYVKVDLVDINDNRPAFYPLSYAVSLSTQSAPGTSVVRVMAYDPDSGENGK ITYKTVPGGASPYFTLNKDTGVISLSRSVYGKVNSIIPMVISAQDGGGLLALDNARVNIS VMAGLVAPPVFEQTQYHLTVSEDALRGTVVGIVQASSKTGNSKSITYTISSGDPAGYFTV DSDTGALRTSLPLDHETQPVLDLEVQARSGNPPAFGQTRVHITIADINDNPPVFLPSSSE SLLLPENTEMGTVVYRIQAEDRDSGLNGQLSFELSSPNGIQRIFSIERSTGEIRLVGSLS YETNPRYDLLVIAKDKGVPPLSATLMLVVHVQAENEQGPVFDTLTYRVELKEGTPINTRF LQVRAMSREVPGLGHLSPLMYHLRPDGDAAGFGIAADSGWLFVKSSLDREQKDMFLLTVL ASVTHGGLKKTGSATVRISVTDENDNAPRLAQQRVFMAVRENLPTGTGFGHILATDRDSG SNGRLNYRFLHTDRHFQINTHTGEISTRMTLDREQQSSYQLMVVVQDGGSPPRSATGTVF ITVLDDNDNDPTFIHSQSGKNVIIQVTEGQSAGAVLGILQAQDPDEGENGTIIYSLSGPR AERFSLNAITGELHSSSPLSHSERAEYTLTATATDRGLPPRSASCSLTIQVISKNSQATK TSLHSISFNSVEEEASPGTVIGSVRLHDRGTAEEGKVTYTVIGGTDRDGTFVVDRLTGDV YLARPLDYERDTRYSLRIEVDDLSQVPPKSTLVNLDINIEDSNDHSPEFAEDPITIVISE NMEVGSSVYTFQAMDKDGSGLNSELKYSILQQWPNTPGLFILDPVTGVLSLGHKLDHEVT STMILVVKATDSALIVSQRRWGSVTARIYVTDENDNPPMFISPTAVSVMEDQPVGFVVLF LMARDADQGENGRVTYRIHSGNTGGTFNLNPNTGSLSIFKPLDREEQDIFNLTVIAEDHG IPQRSSSQMLCVHVIDVNDEVPWFEESHYEAQISENKPVGTSVLTVLASDLDQGTNGLVT YGVSQGSFTINPVTGIITTTKSLDRELQDYYSVTVYAKDGGLPPNYAKATVKIKVLDVND NAPVFGRLYYSIEVPENLDALPLFTLKATDPDTGDSGEISYRITAGDPSENFHIDRKSGV LYTSRPLDREKRPGYTLTVVAQDKGSPPLSSSTTVEVTVLDVNDHRPQFDSSSFTADISE DVPIGSLVLEVKAIDLDNGPNSQIFYFLSHGSQSMFIIDQNTGRIITAAPLDREKTASYT FEVCATDSSPANPLNSTAEVTVYIQDVNDNAPFFVQDPLILNISTSSISNRQILATMRAE DKDFGANGSVFYRFANPVKGFTINSLTGDIQATEKLQTLTQTQRTLIVQAMDQGNPAQSS LGVVIIYIREQNYRGIRFSRTARDVSLQENAAKGTVVTKTEAQYPDGSKTGIIYSIFSGN KIQSFGINSITGEIWVQKSEGLDYEETPKLRLVVKAETASSSSYMAVNLILQDVNDNLPR FQLQNYVAYIKEAQGHNSPIIQVAADDLDQGQNGQVTYSIRSSSMSGLFRIDPLTGSITT GAIMDREIWTQTKLVVVATDRGTPRLAGSATLTVIIVDLNDNSPMIPLPREIRVPEDTLI GTVITRVTGNDVDSGPPLSYTLHLDADSQGMFGVHHYGGGVSLTGSLNYEERTWYTLTVR SSDSEHQSEANLTVLVDDVNDNAPAFTQDLYQVTVSEHLRAGSPLITLTATDCDSGENGR ITYRVMSSTKSAFFIDPSNGTLFISQKTELDFEYPTILVAIEARDHGTPSLSSIATVQVQ VSDVNDNAPVFHQLEYRATVSEDGLPGSTVLTLEAVDGDLFRENCGFDFAIASGNSGNTF QIESSVHFLEGRGFQTVGSLILVEKLDFEVVPTYNLTVVVSDWGIPQRSASVPVLISVTD ANDNPPTFSRTDYSVVLSEGTAMGTEILHLSATDPDSAPNREVQYSISSGDETHLFEVDR WTGVLRLQRLLDSQTRLSHMIVVQATDGQGHYALTSVNIEVKDINDNRPFFPLKSVTASV RENQPPNALVTILHAVDHDKGVFGQLKYYLLDTSKDRQEDFFINQTSGEVRARSTFDFEK VNSFHFVAVAMDAGNYSSTVTVQVYVTGEDEYDPVFISSDFSFKVPEGARKGQIIGKIQA RDEDGGVDGIVLYSLSENSPYFEVNESTGEIAIKMDSNSRHMSRSKREIRLITLDVTAHS PLETSRTAVAKVTIDVSHTSFGLNTDMNMLLVSVIAVSLGTIMILIVIAVALFFVRMRHH KREQRTHKRNTISGTLLHNFEESKLAANEIIYHQALPGYASDQSGNVGGPYTRGGSLDPS HSSGRGSAEAAEDDEIRMINEYPRVSSISSSMQERISARGPDSGIQQDADQLSDVSCEPP LDWFKGKKLSSTNSTLIAGQVPVYRDERGGYVGVGRGLSISHPKDYTFPEDGKPPVDGSL TAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARLKDETAPPHSRRSFHHKAKAES RIDPPPLITSVAHPGAKTVPPKPAISRTFSHLASLRRSPISAEGSISSVAMSPSFSPSLS PLAARSPAVTPFSVSQGPSASLISTTEHSFEHSEEADLQI NT seq 9843 nt NT seq  +upstreamnt  +downstreamnt atgaagacagctgccaagggttttggaaagtttaaaatggatcctttgcattctgatggg tggtttagcagaaggatagtgctaatagtgtatgtggccttggagcttttaacactccat tcatcttttgtctttgggacccttgagctacagctagatgaggaacaaccagctggcaca gttgtgggtgatatcagcgctggacttcctcctggtgtcacggcttccttgtatttcatc tccgaccatgagggcactggagtgggcagtgatttggacatagatgaaagcactggtata attaaaactgccaaagttctggaccgggagttgagagacagatacagcttcattgcagtc accatgacaggtgtgactgttgaagtgactatcaacgtaaatgatataaatgaccacgct ccaaagtttccccgaaaaagagtgacatttaaaattcccgagcagacagccattggcaca agatttcctcttgagccagctgtggacagtgataaaggacagttcacaacacagggttat cttatcaaagatggaaatgttggccaggccttcaccttggagacaaggaggggaagcagt gaggttctcttcctggacttggtggtcaatggcattctagaccgagagaaaagatcaacc tacacgttatctttagaggcctttgatggcggttcacccaaaagaactgaccagataact ttagatattattgtacaagatataaatgacaatgctcctgtttttaaccagagccgctat catgctatcatatctgagaatctccaaccaggaagcaacatcctccaggtgtttgcaaca gatgccgatgagggtgataacgggttggttctgtatgaaatcaacaggaggcaaagtgac cccgatcggtactttgtcgtggacactcggtctgggataatcactttgaacaagccgctg gactttgagatgagaagagtccatgagcttgtggtccaggctcaagacaatgcaacccat ccagaagtgaccaatgcctttgtaaccattcatgtcagagactacaatgacaaccagccc accatgactatcatctttttaagtgaggatgggtctcctagaatctccgaaggtgcgcag ccaggccagtatgtagcccggatctcagtcaccgacccagattacggagagtatgccaat gtgaatgtgtcgttagaaggaggagatggaaaatttggcctgacaacaaaagatagcatc atatatcttgtttgtgtggaccagattctggaccgggaggagagggacacctatgaactg agggtcatggcaacagactcgggcacacccccactacgggcggagtcctcctttgtcatc caggtgactgacatcaatgacaaccctcctctttttgatcagccggtgtacagacaagtg atccccgaagtggtcttcccaggcagctttgtgttgcaggtaactgcaagagataaagac caggggccaaatggagatattaactacagcatcctgcaagatccaagtggctactacagc tggtttagtatagactccatcacaggcattattaccactctatcccagctggattatgaa aagaaccctagtcccagtataactgttgttgccacagatggaggaaaacctcccctttct tccacatcagtggttaacatcttacttcaggatataaatgacaatgagcctgtttttgag aaaaatttctacaacgtgtccatcaaggagaacacagctccagggacctgcattctacag gtgactgcgacagatgcggatggcggctcctttggctcggtgtcatactcccttggctct ggcagtaacagcgctgttccctctcattttaccattggcaagcagacgggccagatctgc attaatgccccactagacagggatcaagggccggacagtttcgacttcactgtaacagcg gtagacgggggtggactgagttcagtagcctacgtgaaggtggatctggttgacattaat gataacagacccgctttctatccactcagttatgctgttagtttgagcacacagagtgcc cctgggacatctgttgtcagagtgatggcctatgaccctgactctggcgagaatggcaaa attacatacaaaacggtacctggaggagcctctccatattttactctcaacaaagataca ggtgttatctccctgtctcggtcagtctatgggaaagtcaactccattattcccatggtt atctctgctcaagacggtgggggactcttagccttagacaatgcaagagtcaacatcagt gtgatggcaggacttgtggcaccacctgtgtttgaacagactcagtaccaccttactgta tcagaggatgccttgcgtgggacagtggtaggcatcgtccaagccagcagtaaaacaggc aattccaagagcatcacctacacaataagctctggggacccagcaggctacttcactgtg gattctgacactggagccttaaggaccagtctgccactggatcacgaaacccagcctgtt cttgatttagaagtgcaggcccgtagtggcaaccctccggcgtttggccaaacccgtgtt cacatcaccatagcagacatcaacgacaaccctccagtgtttttgccctcgtcttcagag tccctgctgctgccggagaacacagagatgggcacggtggtgtatcggatccaagcagag gacagagactcaggactcaatggacaactcagctttgaactttcctctccaaatggaatc cagaggattttcagcatagagcgcagcactggagagatccgattggttggcagcctcagc tatgaaactaacccccgttatgacctcttggtgattgccaaagataaaggcgtgcccccg cttagtgccacccttatgcttgtagttcatgtgcaagcagaaaacgagcagggtcctgtg tttgataccctcacctacagagtggagctaaaagaaggaaccccaataaacactcgcttc ctgcaagtcagggccatgagcagagaggtcccaggcttgggtcatctgagcccgctgatg tatcaccttcgtccagatggagatgctgcaggatttggcattgctgcagacagcggctgg ctgtttgtaaagagctctctagacagagagcagaaggacatgtttcttttaacagtgctg gccagtgtgacccacggagggctaaaaaagacgggaagtgccacggttcgcatatctgtg accgatgagaacgacaatgctcctcggctcgcccagcagagagttttcatggctgtgagg gaaaatctgcccacgggaacaggattcggtcacatattggccacagacagagacagcggg tccaacggacggctcaactaccgcttcctgcatactgaccgccacttccagataaacaca cacacaggtgaaatcagtacaaggatgactcttgatagagagcagcagtcaagctatcag ctgatggtggtggtacaagatggaggttcaccgcctcgctctgcgacaggcaccgtcttc attactgtactcgatgacaatgacaatgatccaactttcatccacagtcagtctggcaaa aatgtcatcatacaggtgactgaaggtcaatctgctggcgctgtgctgggaattctgcaa gcccaagacccagatgaaggagagaatggcacaataatctactccttgtcaggtcccaga gctgagcgtttctctttgaacgcaatcactggcgagctgcactcatcatcccctcttagc cactcagaacgggctgaatacactctgacagcgacagccactgacagaggactacccccg cgcagcgcctcctgctctctcacaattcaggttatcagcaaaaacagtcaagccactaaa acgagcctgcactccatttcattcaactctgtggaggaggaggccagtcctggcactgtt attggatcagttcgccttcatgacagaggaactgcagaagagggcaaggtgacctacaca gtgatcggcgggacagatcgggatgggacttttgttgtggatcgccttactggtgatgtg tatctggctcgtcctcttgactatgaacgagacacacggtacagcctgagaatcgaagtg gatgatttatcgcaggtccctcctaaaagcacgcttgtcaacttggacatcaacatagaa gatagcaacgaccactctcctgagtttgctgaggatcccataacaattgtcatctctgag aacatggaagttggctcttctgtctacactttccaggcgatggataaagatggcagtggg cttaacagtgaactgaaatactccattctccagcagtggccaaatacccctggccttttt attcttgacccggtcactggtgttctttctttgggtcacaagctagatcatgaggtgaca tccacaatgatactggttgtcaaggcaacagattcggccctcattgtcagccagaggcgt tggggttctgtcacagcaaggatctatgtaaccgacgagaacgacaacccaccgatgttc atatcaccaacagcagtcagcgtcatggaggaccagccagtgggctttgtggtgcttttt ctcatggccagagatgcggatcaaggggagaacggtagagtgacctacagaatccattca ggcaacacgggcgggacgtttaacctcaaccctaatacgggctctctttctattttcaaa cctctggaccgtgaggaacaggacatctttaacctcacagtaattgctgaggatcatggg atacctcaacgctcgtctagccagatgctgtgtgtccatgtgattgatgtcaacgatgaa gtgccctggtttgaagagagtcattatgaagcccaaatctctgagaataaacctgtcgga acaagtgtcttaacagtgttggcctcagatctggatcaaggaaccaatgggctcgtgaca tatggtgtctcacagggaagtttcaccatcaacccggtcacaggcatcataacgactacc aagtctttggatagggagcttcaggattattactctgtcacagtttacgcaaaagacgga ggccttccacccaactatgctaaagcaacagtgaagatcaaggtccttgacgtaaatgac aatgcccctgtttttggacgtctctactacagcatagaggtgcctgaaaatctggatgcg ttacctctttttaccctaaaagccacagatccggacacaggagacagtggagagattagc tacagaattacagctggggatccatctgaaaatttccacattgaccgtaaatcaggcgtg ctgtatacttcaaggccgctggatcgagaaaagagacctgggtataccttaacagttgta gctcaggacaaaggcagtcctccgctcagtagcagcaccactgttgaagtgacagttctg gacgttaatgaccacaggccacagtttgacagcagcagctttactgctgacatttcagaa gacgttcccattggttccctggttctagaggtcaaggccattgatttggacaatggaccc aacagtcaaatcttctacttcttgagccatggctctcagagcatgttcattatagaccag aacacaggccgcatcatcactgcagcacccctagatagagagaaaaccgcctcttacacc tttgaggtttgtgcaactgactcatcccctgcaaaccctctaaattcaactgctgaagta acagtctacattcaagatgtgaacgacaatgcaccgtttttcgttcaggatccacttatt ctgaacatctctaccagcagcatatctaataggcaaatcttagccacaatgagggctgag gataaggactttggggctaatgggtctgtgttttatcgctttgccaatcctgtcaaagga tttaccatcaactcactaacaggagacatccaggcaacagaaaagcttcaaactctcacc caaacccaaaggactttgatagttcaggccatggaccaaggaaatcctgctcagtcttcc ttgggagttgttatcatttatattagggagcaaaactacagagggattcgcttctctcgt acagctagagacgtcagtttgcaagaaaacgctgctaaaggcaccgtagtgacaaaaact gaagcccaatatcctgatggctccaaaactgggatcatctacagcattttcagtggaaat aaaattcagtcctttgggataaactctattactggtgaaatttgggtgcagaaatccgaa ggactggactatgaggagactccaaaactccgcctagtggtgaaagcagagacagcatct tccagctcttacatggctgtcaacttaattctacaggatgtgaacgacaacttaccacgg ttccagctccagaactatgtagcatacatcaaagaggcgcaaggtcacaattctcctatt attcaggttgctgcagatgacctcgaccagggtcagaatggtcaggtaacatattccatc aggtcatcatccatgagtggtttgttcagaattgacccgctgactggcagcatcaccact ggcgccatcatggaccgggagatatggacacaaacaaagctcgttgttgtggcaacagac cggggaaccccacggctggctggctccgccaccctcactgtgatcatcgtcgacctcaac gacaacagccccatgattcctctgcctcgagagatccgggtgcctgaggacactcttatt gggacagttatcactcgggtcacaggaaatgatgtggactcgggacccccgctctcctat acactccacctagatgctgacagccaaggcatgtttggagttcatcattatgggggagga gtgtctttgacagggtctctcaactatgaagaaaggacatggtacacactaacagtccgc tcatctgactctgaacatcaaagtgaagccaatcttactgtgctagtggatgatgtgaat gacaatgcccctgcgtttactcaagatttgtaccaggtgaccgtgtcagaacacctacga gcaggcagtccattgatcaccttgacagccactgactgtgactctggtgagaatggaaga attacctacagagtaatgtcatccactaagagtgctttcttcattgatccaagcaatggg actcttttcattagccagaagacagaactggattttgaatatcccaccatccttgtggca attgaagcacgggaccatggtactccgtctctatcatccatcgccactgtccaggtccaa gtgtccgacgttaatgacaacgctcccgttttccaccagttggagtacagagccactgtc tctgaagatggtcttcctggatcaactgttctcacattagaagctgtggatggagacctt ttccgggaaaactgtggttttgattttgccattgccagtggcaactctggtaataccttc cagattgagagcagtgtgcacttcttggagggccggggattccaaacagttggcagcctg attctggttgaaaagctggactttgaagtggtcccaacttataatctgactgttgtggtg tcagattggggaatcccccagcgaagcgccagtgtgcccgtcctaatcagcgttacagat gccaatgataaccctccgacattcagtcgaacagattacagtgttgtgcttagtgaaggt acagcaatggggacggaaatcttgcatttatcagccacagatccagactctgcccccaat agagaggtgcagtactctataagctcaggagatgagacacatctgtttgaggtggatcgt tggactggagtactgaggctgcagagacttctagacagccaaactcggctgtcacatatg attgttgttcaggctactgatggtcaaggccattatgcattgacatcagtaaatattgag gttaaagacataaatgacaacaggcctttcttccctcttaaatcagtaactgcaagtgtc agggagaaccagccccccaatgccttagttaccatattgcatgcagttgaccatgacaag ggagtctttggacagctgaagtattacctgttagatacctctaaagatagacaagaggac ttcttcataaatcaaacatcaggcgaagtacgagcacgctctacatttgactttgagaag gtcaactccttccattttgtagctgttgccatggatgctggcaattattcttccactgta acagtacaggtttatgtcaccggggaagatgaatatgatcctgtcttcatctcatcagac ttctcatttaaagtgccagaaggagcaaggaaaggtcagatcattggcaaaatacaagct agagatgaagacggaggtgtggatggcattgtcctttactcgttatcagaaaattctcct tactttgaagtcaatgaatcaactggagaaattgctataaagatggacagcaactctagg catatgagccgatctaaaagagagatacgcctgattactctggatgttaccgctcacagc cctctagagacttctcgcacagcagtcgccaaagttaccattgacgtgagccatacatct tttggcctcaacacagacatgaatatgctgcttgtcagcgtcattgctgtttcacttggg accataatgattctaatagtaattgctgtggcactattttttgtgagaatgcgacaccac aaaagggagcaaagaacccataaaagaaacacaatttcaggaactctgttgcataatttt gaggaatcaaaactagcagcaaatgaaatcatataccatcaggcacttcctgggtacgca tctgatcagagtggtaatgttgggggtccatacactcgtgggggatccctggatccgtct cattctagtggccggggctctgcagaggcagcagaggatgacgagatccgaatgattaat gaatatcctcgagtgtcaagcatctcttcttccatgcaggagcgtatatctgccagaggt ccagactctggaattcagcaggatgctgatcagctgtcagatgtttcctgtgaaccacct ttagactggtttaaaggaaagaaactgagcagcacaaatagtactttaatagctggccag gtgccagtgtatagggatgaacggggtgggtatgtgggtgtcgggcgaggactcagcatc tcccaccctaaagactataccttcccagaggacgggaagcctcctgtggacggttccctt acagccattgtggccagtgatgaagagctgaggggcagctacaactgggactaccttctt aactggtgcccccagttccaacccctagctaacgtttttacagaaatagcacgtttaaaa gatgaaactgctcctcctcattcccgcaggtcatttcatcataaagcaaaagcagagtca aggattgaccctccgcctctcataacctctgtggcccaccctggggccaaaactgtacct ccaaagcctgccatatcgaggactttctctcacttggcctcattaagaagatctccaatc agcgctgaggggtccatctcctcggtcgcaatgtctcctagtttttccccatctctctcg ccgctggcagctcgttctcctgcagttacacccttcagtgtctcacagggtccctctgcc tccttaatcagcacaactgagcacagttttgaacacagcgaggaggcagatctgcagatt taa

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