Xiphophorus hellerii (green swordtail): 116707733
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Entry
116707733 CDS
T07363
Symbol
tsku
Name
(RefSeq) tsukushin
KO
K08130
tsukushi
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xhe00535
]
116707733 (tsku)
Proteoglycans [BR:
xhe00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
116707733 (tsku)
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GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRR_5
LRR_6
LRR_14
LRR_9
LRR_LRWD1
LRRNT
LRR_EndoS
LRR_NXF1-5
LRR_RPS2
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
116707733
NCBI-ProteinID:
XP_032401135
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Position
18:14465615..14475726
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AA seq
348 aa
AA seq
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MALLLWVGLSLLLAVQSGAVRNCHPSCHCEVESFGLFDSFSLTRVDCRGMGPSVSMPITI
PLDTAHLDLSSNDMGPLSDAMLAGPGYTTLISLDLSSNKITKVSPSALSKLRYLESLDLS
YNNLESLSPSCFSGLPLAEVDLSHNSFQEFDMAVFAAKVNGEPVSVDLSHNKLVSVSATL
HGRALHIQSVNLSVNQLVNVPNMAGLPLRYLNLDANPILKIKKGAFGQLKDLVYLSVSGL
GELHEIEPHSFSDLQNLQVLDLSNNSKLKNLSPAVFCGLDSLQELNLSGSGVTSLPTNML
SHLPSIKSITLGQSIHCWRMQKQGQFHRQMGQVQHNEELHCNVDGIVL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcactgctcttgtgggtcggcctgtcgctgctgctggctgtccagtccggtgcggtc
aggaactgccaccccagctgtcactgtgaggtggaaagcttcgggctcttcgacagcttc
agcctgaccagggtggactgcagaggcatggggcccagcgtctccatgcccattaccatc
cctttggacaccgcccacctggacctgtcgtccaatgatatgggccctctcagcgatgcc
atgttagccggtccaggctacaccacgctaattagtttggacctcagcagcaacaaaatt
actaaggttagccccagtgcgttgtccaaactgcgatacctggagagcttggatctgagc
tacaacaatctggagagtctgtctccaagttgtttctcgggcctccctctggccgaggtg
gacctcagtcacaacagtttccaggagtttgacatggctgtgttcgctgctaaggtgaac
ggtgaacctgtcagcgtggatctgtcccataacaagcttgtgtcagtctctgccaccttg
catggaagagctttacatattcagagtgtcaatttgtcagtgaaccaactggttaacgta
ccaaacatggcgggacttccgctgcggtacctaaatctggacgctaacccaattctgaaa
atcaagaagggagcctttggtcagctgaaagatttggtttatttgtccgtcagtggcctc
ggtgaacttcatgaaattgagccgcatagcttcagcgatctccagaacctgcaagttctg
gacctctcaaataactcgaaacttaagaatctaagccctgcagtcttctgtggactagac
tctctgcaggagctcaacttgtctggttctggtgtgacttctttgccaactaacatgttg
agccaccttcccagcatcaagagtatcactcttggacaaagcatccactgctggaggatg
caaaaacagggacagttccaccgacagatggggcaagtccagcataacgaggagctgcac
tgtaacgtagacggcattgtgttgtga
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