Xiphophorus hellerii (green swordtail): 116707788
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Entry
116707788 CDS
T07363
Symbol
paf1
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog isoform X1
KO
K15174
RNA polymerase II-associated factor 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116707788 (paf1)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
116707788 (paf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
GP11
Motif
Other DBs
NCBI-GeneID:
116707788
NCBI-ProteinID:
XP_032401254
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Position
18:complement(28570063..28576391)
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AA seq
531 aa
AA seq
DB search
MAPTIQTQAQREDGHSRPSSHRTVPERSGIVCRVKYCNSLPDIPFDPKFITYPFDQHRFV
QYKATSLEKQHKHELLTEPDLGVTIDLINPDTYRIDPNILLDPADEKLLEEDIQAPSSSK
RSQQHAKVVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRESQISAI
EKTFEDAQKSVTQHYSKPRVTPVEVLPVFPDFKMWINPCAQVIFDSDPAPKDISGPAGVE
MMSQAMIRGMMDEEGNQFVAYFLPNEETLRKRKRDSEEGLDYMPEDLYDYKIAREYNWNV
KNKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKAGAQSTTNAVLVCKHRDMNEK
ELEAQEARKAQLENHEPEDEEEDMDMDKDMQDSGDEKEKGSGSEAENSGSESEREEEDQE
QSGEDDEENEDRGKRRRKASGSGSESGEERTREMRDEVEIFGSDDDSDDNEPKNSARSSG
EEGSGSEDEAENRRSRSASPARSDHSSDHSETHAPSGSERGSDSSEASDSE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggctccaacgatccaaactcaagctcaacgggaagacggccacagcaggccgtcttct
cacagaacagtgccagaacggtcaggaattgtttgcagagtgaagtactgcaacagcttg
cccgacatcccgtttgatcccaaattcatcacctacccattcgatcagcacaggtttgtc
cagtacaaagccacttctcttgagaagcagcataaacacgagctcctgactgaaccggat
ctcggggtcaccattgacctcatcaatccagacacctaccgcatcgaccctaacattctt
ttggaccctgccgatgaaaaactcttggaagaagacatccaggctccatccagttccaaa
aggtcacaacaacatgccaaagtggtaccatggatgagaaaaacagaatatatttccaca
gagtttaacagatacggcgtttctaacgagaaagtggaagtcaagatcggagtgtctgtt
aaacaacagtttaccgaggaagagatctacaaggaccgggagagccagatttctgccatc
gagaagacgttcgaggatgcacagaagtcggtcacacagcattacagtaaacccagagtc
actcctgtggaggtcttgcctgtgttccctgactttaagatgtggatcaacccatgcgct
caggtcatctttgactctgatcctgcacctaaagacatatcagggccagcaggtgtggaa
atgatgtctcaggctatgatcagaggaatgatggacgaggagggaaatcagtttgtggcc
tacttcttgcccaacgaggaaacgcttcgcaagcggaagagagactcagaagagggactg
gattacatgcctgaggacctgtacgattacaagatcgcaagggaatacaactggaacgtc
aagaacaaagccagcaaaggttatgaggagaattacttcttcatcttcagagatggcgac
ggggtttactacaacgagctggagacgagggtacgcctgagtaagaggagagccaaggct
ggagcacagtccactacaaacgctgtgctggtgtgtaagcacagagatatgaatgagaag
gaactggaggcccaggaagcacgtaaagctcagctggagaaccatgagcccgaagatgag
gaagaagacatggacatggacaaagacatgcaagattctggcgacgagaaagaaaagggc
agcggcagcgaggcagagaactccggcagcgaatccgagagggaagaggaagaccaggag
cagagcggcgaagacgacgaagagaacgaggaccggggtaagaggcggaggaaggccagc
ggcagcgggagcgagagcggcgaggagaggacccgggagatgcgagacgaggtggagatc
ttcggcagcgacgacgacagcgacgacaacgagcccaagaactcggccaggagcagcggc
gaggagggcagcggcagcgaggatgaggcggagaacaggcgaagccgcagcgcctcccca
gcacgcagcgaccacagcagcgaccactcggagacccacgctcccagcggaagcgagagg
ggatcggactcctctgaggccagcgacagcgaataa
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