Xiphophorus hellerii (green swordtail): 116707857
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Entry
116707857 CDS
T07363
Name
(RefSeq) sorting nexin-1-like
KO
K17917
sorting nexin-1/2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116707857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116707857
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116707857
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Macropinocytosis
Sorting nexins
116707857
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116707857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
adh_short_C2
NAD_binding_1
Motif
Other DBs
NCBI-GeneID:
116707857
NCBI-ProteinID:
XP_032401413
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Position
2:complement(27883793..27896598)
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AA seq
742 aa
AA seq
DB search
MATSSERSPPPFPDSEDQDALDSEEVRGRDSDEDDGDELFLSAANTPMAKKESPSAPAGQ
LVDLLSDPLIEPLSSTTNEPSSELFEDLTNDTAVTAGKASDVASDEFVDILGSEAAAQRE
EVDVTVEAAAAADKGETSRGATELLADGETRSATEQKATSAAPVMDLGSSQQPPASAKVT
DPLEDLLSDLPATATSNTHQPGGAVVDLFDDEGSDIFTGAPSSKPAKQPQKSLFGEADED
LFGEPLGAVSKKAAGKEQKEKSVPASAGEPAHIFTKEAVGTVPNARAVDSKTNGIPPEED
SDIFSEATVELSLDSPRSERRKEATTKPPVSASTSVSTSLAKPQSVAVEELEEEEEEELE
DKFDIHVSVKDPEKIGDGMNAYMAYKVSTQTSLPMFRNKTFTVRRRFSDFLGLYEKLSEK
HGPNGLIVPPPPEKNLLGMTKMKVGKEDSSSADFLERRRGALERYLQRVVTHPMLLQDPD
VREFLEKEELPRAVSTQALSGAGFLKMLNKATDAVSKMTIKMNESDVWFEEKLQEVESAD
QQFRKLHALVESLVVHRKELSLNTASFAKSAAMLGSAEDNTALSRALSQLAEVEDKMEQL
HQDQAANDTFSFAEMIADFIRLLGAVRGTFDQRMKAWQRWQDAQAMLQKKRETEAKLLWA
NKPDKLQLAKEEIAEWEVKVTQYERDFERVSATVRKEVVRFEKEKTKNFKRQIIVYLESL
LQSQQQLIKYWEAFLPEAKAIA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagctcagagcgcagtcctcctccgttcccggattccgaggaccaagatgct
ctggactccgaggaagtcagaggccgagacagcgacgaggacgacggggacgagcttttc
ttgagcgcggccaatacgcccatggccaaaaaggagagcccatcagcacctgccggtcag
ctcgttgacctcctgagtgaccctttgattgagcccctcagcagcacgacaaacgaaccc
tcctctgagctttttgaggacctgacaaacgacacagccgtcacagcgggtaaggcgtcg
gacgtggcctcggatgagtttgttgacattctgggaagtgaagctgcagcacaaagagag
gaagtggatgttacggtggaagcagcagcggcggcggataagggtgaaacgagccgtggc
gcaacagagttactcgccgatggagaaacgagaagtgccactgaacagaaagcgacttct
gccgctccagtcatggacctcggcagctcgcagcagccacctgccagtgcaaaggtcacc
gacccactggaggacctcctgagcgatctgccggccaccgccacgtccaacactcaccaa
cccggcggcgcggtggtcgacctcttcgacgacgagggaagcgacattttcaccggagcc
ccgtctagcaaacccgccaagcagcctcagaagagcctcttcggcgaagcggacgaggac
ctgttcggcgagccgctgggcgccgtctcgaagaaagccgccggtaaggagcagaaggag
aaatccgtcccggcttcagctggagaacctgcacacatcttcaccaaggaggcggtcggc
acggtgccaaacgccagagcggtcgactccaaaaccaacggaatccctcccgaagaggac
tctgatatattttcagaagccacagtggagctttccctggacagtccgaggagcgagaga
aggaaagaggcgacgaccaaaccgcctgtttccgcctccacctccgtctcaaccagcctc
gccaagccacagtcggtcgccgtggaagagctggaagaagaggaggaagaggaacttgaa
gataagtttgacatccatgtctctgttaaagaccctgagaaaataggggacggcatgaac
gcctacatggcttataaagtatcaacacagacctctctgccgatgttccgcaacaaaacg
tttacggtgaggcgacgcttcagcgacttcctgggcctctatgagaagctttcagaaaaa
cacggaccgaacggattgatcgttcctccgccgccagaaaaaaacctcctaggaatgaca
aaaatgaaggtgggaaaggaagattcgtcatcggcagactttctggagaggagaagagga
gctttggaaaggtatctccagagagtagtgactcacccaatgctcctgcaggatcctgat
gtcagagaatttctggagaaagaggaactgcccagagccgtcagcacccaggcgctgagc
ggggccggcttccttaagatgctcaacaaggcaacggacgccgtcagtaaaatgaccatc
aagatgaacgagtcggatgtgtggtttgaggagaagctgcaggaggttgagtctgcagat
cagcagttcaggaagctccacgctctggttgagtcgctcgtcgttcacagaaaagagctg
tccctgaacacggcgagcttcgccaagagcgcggccatgctgggtagcgccgaggacaac
acggcgctgtcccgcgccctgtcgcagctggccgaggtggaggacaagatggagcagctc
caccaggaccaggccgccaatgacaccttcagcttcgccgagatgatcgcagacttcatc
cgcctgctgggagcggtcaggggcacgttcgaccagcggatgaaggcgtggcagcgctgg
caggacgcgcaggccatgctgcagaagaagagggagacggaggccaagctgctgtgggcc
aacaagccggacaagctgcagctggccaaggaggagatcgccgagtgggaggtcaaagtg
actcagtatgagagagactttgagagagtttctgcaactgtgcgcaaggaagtcgtccgc
ttcgagaaagaaaagaccaagaatttcaagagacagataatcgtgtacctggagtctctg
cttcagtctcagcagcagctgatcaagtactgggaggcgttcctgcctgaagccaaagcc
atcgcctaa
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