Xiphophorus hellerii (green swordtail): 116707881 Help Entry 116707881         CDS       T07363                                  Symbol spg11 Name (RefSeq) spatacsin   KO K19026   spatacsin Organism xhe  Xiphophorus hellerii (green swordtail) Brite KEGG Orthology (KO) [BR:xhe00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:xhe03400]     116707881 (spg11) DNA repair and recombination proteins [BR:xhe03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      116707881 (spg11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C NuBaID_C NLRX1_C Motif Other DBs NCBI-GeneID:  116707881 NCBI-ProteinID:  XP_032401451 LinkDB All DBs Position 2:complement(28154841..28183708) Genome browser AA seq 2394 aa AA seqDB search MFDGQNSIEVLVIPENQRCGQLADIQKAALCPAGSLLCCLGVSGQLLVWDPGDRGAPPAA SDGCFVDFCWEEANTSVWGVSSFNLLAVGSQGDITLFEAEAEQSTPVSLLTVQKCNVDNL LEIVTESDKSVCELVSVQVLSFMANQCCVLVNNEWILQLQWEQASQEPKTTSCCRIQLTT SDRHTAVHHCVCAETLFVLSSSGLIYVYAITDGSLLASINIPSYLSSSWPDGGLTSSSLS SSSSFCLFQVSADLCTAVAVTQSHAAVAVNLNHYFREHPEHLHCVGPQSSSSLQPKDPGD QDALSSSSLAAVGSPLSDNRAWNTCLASMYARAQQAAYPSSPSKSAGVPWFHSLPHLQSH PAAMSSHSRVPPSGATVAFSVLDSSIPSLLAVSEFSALLTFVAPGNTHTTVALWDMESGR TSYHQAEGTAVPVQHSGERQHRLLLKRSGVFQVLFSMSQEDLLSRLMLFGSAATVDTVCH LNSWGHCSIPFHALQAGVKNRQLDTVDLYLKSKENVLNPSAAAGFSEQLAESKLSLKDSV QELLPALDLLCSAVRELNSEAQSRQFSEQLLNLTMSFISTQIRSVLLWPHYEQSDVQSNV EVLGKYVTELRGYMKRFPWTSGDSTSDTSAPLQRAKSDDWEQLSTEEVIHQSILTNQIPR AQAVMWRQSRPEKQLSALRMVGLRQVLSCLQCKDLKSAKKFLTNMGLSVKKELHSICLYT NNKDLRELLVEDLSKQSSLTEEELEGVSFICEIEKLGLLPAVFCPANPLSQRLPQMVHKE LDGEEVLKESVGQSSEEQGELWRNLRLDWVKTWDQSCRTAVRLSRLQHIELSCCDAAVLW HYLTAFHHHQKVVDWIHNQRTFGSPCWPDITPEMVNNNTVCSIFFKENILDLLAGKGVFI PDEMSDLEQLLWRLAQGAGLMTSSPPVSQYCSPVGLNLHSVFIALCLEHNLQYLLYTYLE HYRLTPRNCPLLTDQNLLGSQPWFEMMVKTQEITRDLSEPEPVFQASLTSAQVLLPGSQA SLSSLLFEGHSLLALASIMFAHGGIDKVVAQGQSSTGLEGTVDPQLLKMALAPHYKLRAA LFPSGNGSSTDISIYHLLQSLHPLDPSRLFSWQTANPLNCTETSELPHFSSSHLVDKFAI VENLDFLYYIHHGRPSFAYGNFLIQQLGVCSDVQLLLQTVWLQVYRLALKCFNKPSVTSS AVCFCELLGICSLKLRVNIRAMNTILQHWNQLDRHTPTQNLRALMSKAGKLVNGEPGAAA ELLCYLEAAVADSLEQRGISRSSFEAAQEWALPVQFCQLHSLELSLIYPSHCAEDRQFVH FLLFVQLHSFPPQQVRSLVGLFDPVLQAHLSLAFQDLQVHSQRRSRDPEERLGFLRTDVA PGGSEHGGELFQLLLQSQEKQVSWRFLLHEAIVRHCPMLAVLAACLQGTDLLSCLCVWML TSVVDATTEEATSHLAEAPQDHEWTLHDLSIIWKTLLSQGHIRVLLRGFELFQQDCPLVL VLRMFELCCDYRKFAEAKTKLLDFQRALITLRNGGPAAAGSLPLQWVESQASALLLTMLL RCSSQYDLHQLLQLLADVDKLLKSNGPDLRKLSQLSQLLQGSGVTLSQSLLQCIPPSVQQ EEFQLIVDALQTGGHYSQARQVAVLAGLPVHRLLMSQLLQEVNVHKSKWRWRRLETRVAF WNKCHRRLEADSTDPESAGQFFLSQSEAAAGPDGDQAQTNVLDIQECCLLLQLTAHWLSL QTPVPVDELQRLEKKLWFCQVQKHILTTTVEEKSMFNLLPPAITSETNEYEMFMKEFSFS NVADLNMEKYLSLEGFPEKPEELEAESDLSSEERSVLAILIDQLLDKGSIHEASRVCRYF SMHSPDVWLVLCCHALACGFLVPEPQEQTSEPAETKALTQSPSLSILSSFVMVPLHEDAV TVQIQKRVEQCRHGSSYCKQVLSLYQLSKELQCPFSHISREEPHSVLEKLLLLVQPDRFR MAKTFIKTQGLSADSVAELVSNAVVQGLLAATQELQPGERLIFRPSEGQESLLQLIRLCE DPNIVGLKLLENLNTVPLRDLNSIVELLIVAHSCFSLTCNMEGIVRVLQAARHLSHTYLA PGEHYSLLVRLLTGIGRYNEMTYIFDLLHQNHCFEMLLRKKVDRDIGQSSSLKTSLLDYI KRCLPADSEKHNMVALCFSMRREIGENHEIAARTQLKMIESQDWVVTPDLKNSLVKVLGL LKDAAESFSKDSCVHQAGRCVRAAKLITLQLHLLNQGSTLRIINLKPAEMHSAIMALPQC YQVFVVAEAYSYSPDWAEILYQKVVLKGHFVYLEELKCHRPLTSALFEDIFRKLDSVPSS VCSNAKRLLSHCDDVYTRYRLAYQQNLYDVTKTLLQDNKTSCYMNDRLASKAFI NT seq 7185 nt NT seq  +upstreamnt  +downstreamnt atgtttgacgggcagaactcaatagaggtgctggttattcctgagaaccagcgctgtggt cagcttgcagacatccagaaagccgcgctgtgccctgcgggctccctcctctgctgcctt ggcgtctcgggccagctgttggtgtgggaccctggggacagaggggcccctccggctgca tcggacggctgctttgtagatttctgctgggaggaggcgaatacaagcgtttggggagtc agcagctttaatttgttggctgttggatcacagggtgacataacgctattcgaggctgaa gcagaacaatccaccccagtttctttgctgactgtgcaaaagtgtaatgtagataatctg ctggaaattgtcacggagagcgacaaaagtgtgtgtgagctggtgtctgtacaggtgttg tcctttatggccaaccagtgctgtgtactggtaaacaatgagtggattctgcagctgcag tgggaacaggcatcacaggaaccaaagacgacctcctgctgcagaatccagctaacaacc agtgacagacatactgctgttcaccactgtgtctgtgcagaaaccctatttgtcctcagc tccagtggactcatatatgtgtatgccattactgatggttctctgctggccagcatcaac attccttcctacctgagctctagttggccggatggcggcctgacttcctcttcactctcc tcctcctcctctttctgccttttccaggtgtcagcagatctctgcacagctgtagctgta actcagtctcatgcagcagtcgccgttaaccttaaccactacttcagagaacacccagaa cacctccactgtgttggcccccagtcctcttcctcacttcagcccaaggatccaggagac caggacgccctgtccagctccagtcttgctgctgttggttcaccactcagtgataaccgt gcctggaacacttgtctagcatccatgtatgccagagcgcagcaggcggcctatccctca tccccctctaagtcagcaggggttccatggttccactcgctcccccacctgcagtcccac ccagctgccatgtcctcccacagcagagtgcctcccagtggggcgaccgtggccttctct gtccttgactcatccattccatctcttcttgccgtttctgagttttctgcacttttgacc tttgttgctcctggcaacacacacacaacagtggcattatgggatatggagtctgggaga acgagctaccaccaggctgaaggaacggctgtgccagtgcagcacagtggagagagacag cacagactgctgctgaagaggtccggtgtgttccaggtcttgttttccatgtcccaggag gatttattaagcaggttgatgttgtttggcagtgcagcaacagtggacacagtctgtcac cttaacagctgggggcactgctccattcccttccacgcgctgcaggctggagtgaaaaac cgacagcttgacacagtggatttgtacctgaaaagtaaagaaaatgtcctgaacccatca gcagcagctggtttttctgagcagttagcagaatccaaactgagtctcaaggacagtgtc caggagttgttgcctgcgttggatttgttgtgttcggcggtcagagagctgaacagtgaa gctcagagccgacagttctctgagcagctgctcaacctcaccatgagcttcattagcaca cagatccgctctgtgctcctctggccacattatgagcagtcagacgtgcagagcaatgtt gaagttctgggcaagtatgtcacagagttgaggggttatatgaagagattcccctggact tcaggcgactccacatctgatactagtgctcctctccagagagcaaagagtgatgactgg gagcaactttcaacggaggaagttatccatcagtcgatcctgaccaatcagatcccccga gctcaggccgtaatgtggagacagagccggcctgaaaagcagctgtcagctctgaggatg gtgggcctgcgccaagttttgtcctgcttgcagtgcaaggacctaaagtctgccaagaaa ttcctgaccaacatgggtctcagtgtgaagaaagagcttcacagcatctgcctttatacc aacaacaaagatctccgggaattgttggtagaggatctgtcaaagcagagttctctgact gaagaagagctggagggcgtctcgttcatctgtgagatagagaagcttggcctgctgcct gcagtcttctgcccagctaatcccctttcacaacggttacctcagatggttcataaggag ctagatggtgaagaagtgctgaaggagtcggtgggacagagttctgaggagcagggagaa ctctggaggaacctccgactggactgggtgaagacctgggatcagagctgccggacggct gttcgcttatccaggctgcagcacatagagctgagctgctgtgacgctgcagtgttgtgg cattacctgactgcttttcaccaccatcagaaggtggttgactggattcacaatcaaagg acctttggctccccctgttggccggacataactcctgagatggtcaacaataacacggtg tgcagcatcttcttcaaggagaacatcttggaccttctagctgggaaaggtgtgtttatc ccagatgagatgtcagacttggagcagctgctatggcgactggctcagggtgctgggttg atgacgtcatccccccccgtatctcagtattgctcccctgtcggccttaacctacacagt gtcttcattgcattgtgcctggagcataatcttcagtacctgctttatacctacctggag cactacagactgacgcccagaaactgccccctccttaccgatcagaacctgctggggagt cagccctggtttgagatgatggtgaagacccaggagataaccagagacctgtcagaacca gaacccgtgttccaggcgagtctgaccagcgctcaggtgctgctacccggtagccaggcc tctctgagcagcttactgtttgagggacacagtctgctggcgctggcttccatcatgttt gctcatggtggaattgataaggtggtggctcagggacagagttcaacaggtttggagggg actgttgacccccagctcctgaagatggcactggcccctcattacaagctgagagccgcc ctcttcccatctgggaatggctcatccactgacatctccatttatcaccttctccagtcg cttcaccctcttgacccatccaggctctttagttggcagactgcaaaccctctgaactgc actgaaacatccgaactgcctcatttttctagctctcatctggttgataagttcgctata gtagaaaacctggactttctttactacatccatcatggtcgaccatcttttgcatatgga aactttctcatccagcagctgggggtctgcagtgatgtgcagttgctgctccagacggtc tggctgcaggtgtacagattggctctgaagtgtttcaacaagccgtctgtgacatcgtct gctgtgtgtttctgtgagctgctgggaatctgcagcctgaagctaagagtcaacatcaga gccatgaacaccatccttcagcactggaaccaactggacaggcacacaccaacgcagaat ctgcgagcattaatgtctaaagcaggaaagctggtgaatggagagccgggagctgcagca gagctgctttgttacctggaggctgcagtggcagacagtctggagcagagggggatcagc aggtcgtcgttcgaggcggctcaggagtgggccttacctgttcagttctgtcagctccac agtctggagctcagtctgatttatcccagccactgtgccgaggacagacaatttgtacac tttttattgtttgtccaactgcacagtttcccaccccagcaggtgaggtccctggtaggt ctctttgaccccgtcttgcaggctcacctaagccttgcatttcaagacctgcaggttcac agtcagagaaggagccgagaccctgaggaacggctgggctttctgagaacagacgtggcc cctgggggctctgaacacggcggggagctgttccagctgctgctgcagagccaggagaag caagtgtcatggaggtttctcctacatgaggcaatagttcgacactgcccgatgctggca gtacttgctgcctgtctgcagggaacagatctgctgtcatgtctgtgtgtgtggatgctg acctctgtcgttgacgcaacaacagaagaggccacttcacacctcgccgaagccccccag gaccatgaatggaccctccatgacctgtcaatcatctggaagacgttgctgtcgcagggt cacatccgggtcctcctgcgaggatttgagctttttcagcaggactgccccctggtgttg gttctgagaatgttcgagttgtgttgcgattacagaaaattcgctgaggccaagacgaag ttgttggactttcagagggcacttattactctcagaaacggtggccctgccgctgcaggc agccttccactgcagtgggtggagagccaggcctcagcgctgctcctcaccatgctgctg cgctgctcctcccagtacgaccttcaccagctgctgcagctcctggctgatgtggacaaa cttctcaaatccaacggtccagacttaaggaaattgagccagctgagtcagctgctgcaa ggatcaggtgtgactctgtcccagagcctgctgcagtgcattcccccctccgtccagcag gaggagtttcagctgatagtggatgctttgcaaactggaggacactacagccaggccaga caggtggcagtgctggctggtctgcctgtccaccgcctcctcatgagccagctgcttcag gaagtaaacgtccacaagagcaagtggcggtggagacgtttggagacccgagtggccttc tggaacaagtgccacaggcgactggaagctgacagcactgacccagagtcggccgggcag ttctttctatctcagtctgaggctgccgccggccctgatggtgaccaggctcagacaaat gttctggacatccaggagtgctgcttgctgctccagctcacggctcactggctttccttg caaactcctgttcctgtagatgagctgcagaggctggagaaaaagctgtggttctgtcag gtccagaagcacattctcacaactacagtagaggaaaagagcatgttcaacctgctgcca ccggcaatcacgtctgaaaccaacgaatatgagatgttcatgaaggagttttcgttctct aacgtcgcagacctgaatatggagaagtacctgagtctggagggattcccagaaaagcct gaggagttggaggcagaatcagatttaagttctgaagagagaagtgttttggcaatactt attgaccagttactagataagggtagtatacatgaagccagtcgtgtttgccgctatttc agcatgcacagtccagatgtatggttggttctgtgctgccatgctctggcatgtggattc ttggtaccggaaccacaagagcagacctcagaacccgcagaaacaaaggctctaacccag tccccctctctcagcattctgtcctcatttgtgatggtgcccctccacgaagacgccgtc actgtccagatccagaagcgggtggagcagtgtcgccatggaagcagctactgcaaacaa gtcctcagtctctaccaactctccaaggaactgcagtgccccttcagtcatatcagcaga gaggaacctcattctgtgttagagaagctgctgctgttggtgcaaccagatcggttcagg atggccaagaccttcatcaaaactcagggtcttagtgctgacagtgtggctgagttggtc tccaacgctgtggttcaaggcctgctggcggcaacccaggagctgcagcctggagaaagg ctgattttcagaccatcagaggggcaggagtcactgctgcaactgatcagactgtgtgaa gatccaaacatagtgggcctcaaactgctggaaaaccttaacactgttccactgagggac ctgaactccattgtggagctgctgattgtggctcacagctgcttcagtctcacttgcaac atggagggaattgttcgagttctccaagctgctcgtcatctcagccacacctacctggct ccaggagagcactacagcctgctggtgcgtctgctgacgggtatcggcaggtacaatgag atgacgtacatcttcgatttgctccatcagaaccattgttttgagatgctactgagaaag aaggtggacagagacataggacagagctccagtttgaagacttctctgctggattacatc aaacgctgcctccctgctgacagtgagaagcacaacatggtggcgctgtgtttcagcatg agaagggaaattggagaaaaccatgaaatagccgccaggacacagctgaagatgattgaa tctcaggactgggttgtgactcctgatcttaagaactcattggtcaaagtattgggtctg ctaaaggatgctgcagaaagtttctccaaggactcctgtgtgcatcaggctggtcgttgt gtccgtgcagccaaactgatcactcttcagctccacttgttgaaccagggatccacccta cgcatcatcaacctaaagcctgcagagatgcacagtgccatcatggctctgccacagtgt taccaggtgtttgttgtcgcggaagcgtacagctacagtccagactgggctgagatcttg tatcagaaagtggttctgaagggacactttgtttacctcgaggagctgaaatgccaccgt cctctcacctccgccctatttgaagacattttcagaaagctggacagtgtccccagcagc gtctgttccaacgcgaagcgtctgctcagtcactgtgatgatgtgtacacccgctacaga ctggcctaccagcagaatctctatgatgtcaccaaaacactgctgcaggataacaagacc tcctgctacatgaatgacagacttgccagtaaagcatttatctga

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