Xiphophorus hellerii (green swordtail): 116707923
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Entry
116707923 CDS
T07363
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116707923 (rfwd3)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116707923 (rfwd3)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116707923 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_THOC3
Beta-prop_WDR5
zf-RING_2
WD40
EIF3I
zf-RING_UBOX
WD40_CDC20-Fz
zf-C3HC4
Beta-prop_EML_2
zf-C3HC4_2
WDR55
Beta-prop_WDR3_1st
Rtf2
WD40_Prp19
zf-RING_5
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
WD40_WDHD1_1st
zf-RING_Vps41
Beta-prop_RIG_2nd
WD40_2
zf-C3HC4_4
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_LRRK2
Beta-prop_EML
zf-RING_11
zf-Nse
NBCH_WD40
Beta-prop_SPT8
CFAP43_N
RING_XB3-XBAT31
Cadherin_tail
FYVE
Motif
Other DBs
NCBI-GeneID:
116707923
NCBI-ProteinID:
XP_032401523
LinkDB
All DBs
Position
2:28282496..28297404
Genome browser
AA seq
746 aa
AA seq
DB search
MQDVSPRGPTLGTPAINDLSSFLFFYSEQMEAMEIDSPRDRLGSAVAGPTIVIVREPERV
YTTVITTDSGSGTEIDDDYDDAGAPEAVQAPFRLPATWAFSQRAIDGVPAVPAVTQGEPM
RRSLRQGLRVYYPSQTAAPSRGFPDFLLRAPAASVTQPGSGSTTEESESEFEEEAEESTA
AGAEASLHLPSAAPIPNAATEQSQPEAAAAAAAPSRTEAVSAAANEAGGDAQILDLQPTP
AAPSSSQPSRSGDSEGETCSICFEVWTTAGEHRLSALRCGHLFGNTCIKRWLKAQGATAK
CPQCNKKAKNSDIVLLYAPKLRALDNSEQESLKRSLEQEQSLRRKAELESAEYKLKLQVV
SSKFGQAQQELQELKTLMAQTGRSSAPPSSSMFSLSQRADGSRAAQYSFSKAVLVSQTGG
CRVLSYCEPLSCLLASQPSPHSTLVPGCGVKKVSLVNMKASQYVPIHSKQIRGLSFSREN
NSLLLSAALDNTVKLTSLLTNTVVQTYKTDKPVWSCCWSLDNSNYIYAGLSNGSVLVYDT
RDTSTHIHELQPLRSRCPVASLCYVPRVASSSFPCGGLIAGSLEGACFWEQENETTYRPH
ILPLESGGCTDIQVETESRHCLVTYRPGRSHQTVRCVLMALTRAPQLDSSQLPSCSCSPV
QTFSAGSSCKLLTKNTIFRHPEGSGMLVCAGDEASNSTMVWDAGSGSLLQKLPADLPVLD
ISPFSVNGENFLASLTEKMVKLYKWE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgtcagcccacggggaccgactttgggcacccctgcgataaatgacctgtca
tcatttctgtttttctactctgagcagatggaggccatggagatagactcgcctagagat
agactcggctctgcagttgctggtcctacgattgtaattgttcgtgagcctgagagggtc
tataccactgtaatcacgacagactctggaagcggcactgagatagatgatgattatgat
gatgctggagccccggaggcggttcaggctcctttcaggcttcctgccacctgggccttc
agtcagagggccatagatggagtcccagctgtgcctgcagtaacccagggggaaccgatg
cggaggtcactcagacagggtctcagggtctattaccccagccagacggcagcaccttcc
agaggatttccagacttcctgctccgagcaccagctgccagtgtaactcagccagggtct
ggcagcaccactgaggaaagtgagtccgagtttgaggaggaagcggaagaaagcacagct
gctggggcggaggcctcactacatttaccttctgccgctcctattcctaatgctgctacc
gagcagtctcaaccagaagcagcagcagcagcagcagcgcccagtcgtactgaagctgtt
tcagcagcagcaaacgaggctgggggcgacgctcaaatcctggacctccagccgacccct
gcggccccgtcttcatcccagccaagccgcagtggcgacagcgaaggcgaaacctgctcc
atctgctttgaggtgtggaccacagcaggcgaacaccggctctccgctctgcgctgtgga
cacctcttcggcaacacgtgcatcaagcgctggctcaaggctcagggcgctactgctaaa
tgtccgcagtgcaacaagaaagcaaagaattcagacattgtgctgctgtacgctccaaag
ctgagagccctggacaactctgagcaggagagcctgaagaggtctttggagcaggagcag
tctctgaggagaaaagctgaactggagtcggcagaatacaaactcaagcttcaggttgtc
tccagcaaatttggacaggcacagcaagagctgcaggagctgaagactttgatggcccaa
actggaagaagttcagctccaccctcttcctccatgttcagcctgtctcagagggcggac
ggctccagggcagctcagtacagcttctctaaggcggttctggtgtctcagacaggcggc
tgcagagttctgtcctactgtgaacctctgtcctgcctgctggcctcacagccctcccct
cactctacactagtgcctggttgtggggtgaagaaggtgagcttggtgaacatgaaagcc
agtcagtacgttcccatccacagcaaacagataagaggtctgtcgttcagcagagagaac
aacagcctgctgctatctgctgcactggacaacactgttaaactgaccagcttgcttacc
aacacggtggttcagacttataagacggataagcctgtgtggagctgctgctggtctttg
gacaacagcaactacatctacgctggtctgagcaacggctccgtgctcgtttacgacacc
agggacaccagcacgcacattcatgagctgcaacctcttcgctccaggtgcccagtggcg
tcgttgtgctacgtcccgcgcgtggcgtccagctctttcccctgcggcgggctgattgct
ggctcacttgagggtgcttgtttctgggagcaggagaatgagaccacctacagaccccat
attctgcctttagagagtggcggctgcacagacatccaggtggagactgagagcagacac
tgtctggtcacataccggcctggacgctcccatcagactgtacgatgcgtcctgatggcg
ctgactcgcgcgcctcagctggactccagtcagctgcccagctgctcctgctcccctgtg
cagacattcagcgctgggtcatcctgcaaactgctgaccaagaacaccatcttcaggcat
ccagagggcagtgggatgttggtatgtgctggggacgaggcctccaactccaccatggtg
tgggatgcgggaagtggctctctgcttcagaagcttccagctgacctaccagtgttggac
atcagccccttttctgtgaatggagagaactttctggcctctctcacagagaagatggtg
aaactttacaaatgggagtaa
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