Xiphophorus hellerii (green swordtail): 116707924
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Entry
116707924 CDS
T07363
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03410
Base excision repair
xhe04140
Autophagy - animal
xhe04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116707924
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116707924
09143 Cell growth and death
04217 Necroptosis
116707924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116707924
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116707924
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116707924
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
116707924
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116707924
MMR (mismatch excision repair)
Other MMR factors
116707924
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116707924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
Ets
Motif
Other DBs
NCBI-GeneID:
116707924
NCBI-ProteinID:
XP_032401520
LinkDB
All DBs
Position
18:9761888..9765805
Genome browser
AA seq
199 aa
AA seq
DB search
MVKDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFE
DMAKQDKLRYEREMKNYVPPKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKVKGESPGLS
IGDTAKKLGEMWNSLSGEEKQPYEKKAAKLKEKYDKDIVAYRTKGRVDSAPAAAANDDED
DDEEEGDEEEEEEEEDDDE
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggatcccaagaagccccggggcaaaatgtcctcatatgcctactttgtgcaa
acctgccgagaggagcataaaaagaagcatcctgatgcctctgtcaacttctcagagttt
tccaagaaatgctctgaacgatggaagacaatgtcaccaaaggaaaagggaaagtttgaa
gacatggccaaacaggacaagctgcgttatgagagggaaatgaagaactacgtgcccccc
aagggccagaaaaagaaacgattcaaggacccaaatgccccaaagagaccaccgtctgcg
ttctttctcttctgcgccgactttcgccccaaggttaaaggtgagagtcctggactctcc
attggggacacggccaaaaagcttggagagatgtggaacagcttgtctggagaagaaaag
cagccttacgaaaaaaaggctgccaagctgaaggagaaatatgacaaggatattgtggca
taccgcacaaagggcagagtggattcagcaccagctgctgcagcgaatgacgatgaggac
gatgacgaagaggagggagatgaggaggaggaagaggaagaagaagacgatgatgagtaa
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