Xiphophorus hellerii (green swordtail): 116707935
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Entry
116707935 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein Nova-1-like
KO
K14944
RNA-binding protein Nova
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116707935
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116707935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
116707935
NCBI-ProteinID:
XP_032401533
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Position
18:3031698..3048349
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AA seq
642 aa
AA seq
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MMGPQARTGGQQDPQGSFAPAHLDILDEETQRLDSSLEMENARIEDDQNPAELEAKLKEM
ELRLKRQEALRETLINEAEETMRELERLEREEREEMSSDPAERYAADIDSTFYNDVKNME
KTLQQEFEDLKVAHLLSQEAFVAGIQAERKKTEAVQEELDQLKTSYKELRYKYDADISLV
RQEVKHEKDANIEREKESLKLVNKLKAEKEELFRKMAREIFILRKREKQMLNELDQVHIS
HEELKQSSDETEVTGETILQDSDNPDASCLRDLACCAERLLDLRLKYFPVNNSSSVFLSS
QQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNR
KAVEIIIQKIQEDPQSSSCLNISYSNITGPVANSNPTGSPYANSTEVMPAAAAAAAATAS
SLLGQAGLAGVGAFPTTMSSFSGNDLLAITSALNTLASYGYNTNSLGLGLNPAAASGVLA
AVAANANPAAAAAANLLASYASDASTSAAHPVASLGGLSLGSLAAATGATNGYLSAASPL
VASSLLATEKLAEGAKEVVEIAVPENLVGAXLGKGGKTLVEYQELTGARIQISKKGEFIP
GTRNRKVTITGSQAATQAAQYLISQRITYEQGVRATNPQKVG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaccccaggcgagaacgggaggccagcaagacccccaaggcagcttcgctcct
gcacatctggatatattagatgaggaaacccaaagactggactccagtctggaaatggag
aacgccaggatagaagacgaccaaaacccggccgagctggaggccaaactgaaagagatg
gaactgagactaaaaaggcaggaagctctcagagaaactcttatcaacgaggccgaagag
acaatgagggaactggagagattagagagagaagagagggaagagatgtccagtgatcca
gcagaacgttacgctgcagacattgattccacattttataacgatgtgaaaaacatggag
aagaccttgcagcaggagtttgaggatttaaaggtggcccacctcctcagccaggaagca
tttgttgctggaatacaggctgagagaaagaaaactgaggctgtccaagaagaactggac
caacttaagacttcatacaaggagctgcgatataaatatgatgcagacatttctctggta
aggcaggaggtgaaacatgagaaagatgcaaacatagaaagagaaaaagagagtctgaag
ctagtcaacaagctgaaagctgagaaggaggagctctttcgaaaaatggctagagaaatc
tttattctgagaaagagagagaagcagatgctgaacgaactggatcaggttcacatttcg
cacgaggagctgaaacaatcctcagacgagaccgaggtcactggagaaaccatcctgcag
gattcggacaatccagatgcgagttgtctgcgggatcttgcgtgttgtgctgaacgtctc
ctggacttgcggttaaaatattttcctgttaataactcttcttctgtcttcttgtcctcc
caacaggccaagctgattgtccccaacagcacagccggcctcatcatcggcaaaggcgga
gctacggtcaaggcggtgatggagcagtctggggcttgggtccagctatcccagaagccc
gagggcatcaacctgcaggagcgtgtggtcaccatcagtggcgagccggagcagaaccgc
aaagccgtggagattatcatccagaagatccaggaagaccctcagagctcctcctgcctg
aacatctcctactccaacatcaccggtccggtggccaactccaaccccaccggctccccg
tacgccaactccaccgaggtgatgccggcggcggcggccgctgcagccgccaccgcctcc
tctctgctgggccaggcgggcctggcgggagtcggcgcgttcccgaccaccatgtccagt
ttctcaggcaacgatttgctcgccatcacctccgcgctcaacaccctggccagctacggc
tacaacaccaactctctggggctggggctcaatcccgccgccgcttccggggtgctagcc
gccgtagcggctaacgccaacccagcagcagccgccgcggctaatttgttagcgtcgtac
gccagcgacgcgtctaccagcgcggcgcaccctgtcgcgagcctgggaggcctctctctg
gggtcactggcagccgccactggcgccaccaatggctacctgagcgcggcgtcgcctctg
gtggcgtcgtccctcctggcgactgagaagctagcagagggagcgaaggaagtggtcgag
atcgccgtgccggagaacctcgtcggcgccnatcttgggaaaggcgggaagacgctagtg
gagtaccaggagctgaccggcgccaggatccagatctcgaagaaaggcgagttcatcccg
ggaactcggaacaggaaggtgaccatcacggggtcgcaggccgccacgcaggccgcgcag
tacctgatcagtcagcggatcacctacgagcagggcgtccgcgccaccaacccacagaag
gtgggctaa
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