Xiphophorus hellerii (green swordtail): 116707951
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Entry
116707951 CDS
T07363
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116707951 (vps53)
Membrane trafficking [BR:
xhe04131
]
Protein recycling
Others
EARP complex
116707951 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
116707951 (vps53)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
Laminin_II
VPS51_Exo84_N
GrpE
FBF1
Syndetin_C
NBD94
Sec8_N
Motif
Other DBs
NCBI-GeneID:
116707951
NCBI-ProteinID:
XP_032401549
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Position
18:20822917..20855732
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AA seq
832 aa
AA seq
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MMEEEEFEFTEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDDIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPAQGSKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITKVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDIPGQQKRPDSPLDQTNPFLEDDPGEDVGSEKDEDLAKPRKPKAPDNPFHGI
ISKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSGGLTITSLLKEKEGYE
AAKFNVDELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLVERINLTGEMDTFSTVISN
SIQLLVQDLDAACDPALSAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTR
KYFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRK
APASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKR
SEQSSMLELFRQRLPTPPSGSDSGPSLSFSAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaagaatttgaatttaccgaagatttagaggcaattttgcatctaact
ccggaggtgcaactagccattgaacaggttttccccagccaggaccctctggacagagca
gacttcaatgctgtggagtacatcaacacactcttccccaccgaacagtctttggcgaat
atcgatgatgttgtaaataaaattcgactgaagataaggcgtcttgacgatgatatcagg
acagtagtgagaggtcagaccaacgtgggacaggacggcagacaggctttggaggaggcc
cagatagccatccagcaactctttggcaaaatcaaagacattaaggacaaggcagagaag
tcggaacaaatggtcaaggagataacgagggacatcaagcagttggatcatgccaagcgt
cacctcactacttccataaccaccctcaaccacctgcacatgttggcggggggtgtcgac
tctttagaagccatgaccagaaagcggcagtatggagaggtggccaacttgctgcaggga
gtggttaatgtgcttgaacacttccaaaaatacatgggcatacctcagatcaggcagctt
tcagagagagtgaaggcagcacagagtgagctggggactcagattctggcagattttgaa
gaagcctttcctgctcaaggctccaagagacccggtggacccagtaatgtcctcagagat
gcctgcctggtggcaaatgtactcgacccgcgcatcaaacaggagatcatcaaaaagttt
atcaggcagcacctctcggagtatctggttctcttccaggaaaatcaagatgtcgcctgg
ctggataagattgatcgccgctatgcttggatcaagcgacagctggtagactacgaggaa
aaatatggtcgcatgtttcctgaagagtggtgcatgacggagcgaatcgctgtggagttc
tgccacatcaccaaggtggaactagccaaggtgatgcgaacacgggcaaaggaaattgaa
gtgaaactgcttctgttcgctatccagaggacgacaaactttgagggtttgctggccaag
cgcttcacaggatgcaccttaacggatatacctgggcagcagaagagaccagatagccca
ctagatcaaactaacccatttttagaggacgatccgggggaagatgtgggatcagaaaag
gatgaagatcttgctaagccgaggaagcccaaagctcccgacaatccatttcatggcatt
atctccaagtgttttgagcctcatctctacgtctacattgagtcccaagacaagaacctt
ggggaattgattgaccgttttgtggctgatttccgagcacaaggcccacccaaggcaggg
accgaggagggtggcgcagtgctgcccagctgtgccgacctcttcgtttactacaagaag
tgtatggtccagtgttcccaactgagcacaggcgaacccatgatcgccctcacaacaatc
ttccagaagttcctcagagaatacgcctggaaaatcctttctggcaacctgccaaaatcc
agcagtaacagcgggggtctcaccatcaccagcctgctgaaggaaaaagaaggctatgag
gcagcgaagttcaatgtagatgagctctgcctgatctgcagcatccttagtacggcagaa
tactgtctggctaccacacaacagctggaggagaagctgaaggaaaaagtagataaggtc
ctggtggagagaataaatctgaccggggagatggacactttcagcactgtgatctcaaac
agtatccagctgctggttcaggatctcgatgctgcctgcgatcccgctctgagtgctatg
agcaagatgccgtggcagagcgtggagcatgtgggtgaccagagtccttacgtcacatca
atcatcatgcacattaagcaaaacgtgcccatcatcagagacaaccttgcctctactcga
aaatacttcacacagttttgcatcaaatttacaaactctttcattcctaaatttattaac
cacttgttcagatgtaagcctatcagcatggtgggagccgagcagctcctcctggataca
cactccctgaagacagttttgttggatcttccatccataggctcccaggtgctcagaaag
gcgcctgccagttataccaagattgtagtgaaaggcatgacgcgtgcagagatgatactt
aaggtggtgatggccccacacgaaccaccagtggtgttcgttgataactacatcaaactt
ctggctgatgggaacccagagaccttccaaaagattttggatatgaagggtctgaagcgc
agtgaacaaagcagcatgctggagctcttcaggcagaggttacccactccaccctctgga
tctgacagcggcccatccctgtccttcagtgcccccaccccagagcaagagtcgtctcgt
atccgcaagctggagaagctcatcaaaaagagactgtga
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