Xiphophorus hellerii (green swordtail): 116708048
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Entry
116708048 CDS
T07363
Symbol
pax3
Name
(RefSeq) paired box protein Pax-3 isoform X1
KO
K09381
paired box protein 3/7
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116708048 (pax3)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116708048 (pax3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
HTH_32
Homeobox_KN
HTH_23
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
116708048
NCBI-ProteinID:
XP_032401699
LinkDB
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Position
18:complement(10945200..10974127)
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AA seq
496 aa
AA seq
DB search
MTALAGSVPRMMRPTLAQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQGTTPDVERRIEE
YKRENPGMFSWEIRDKLLKDGICDRNNVPSVSSISRIMRTKFGGKGEEEEEEDEIEKKEL
EDSERRAKHSIEGILGDRSSHSDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAM
SSIPPYQLSDSTYSPSSIAQVSEPPSTVHRPQPLPPSSGHQASAGGVQADGGSAYCLASG
RHSFSGYSDSFVSPGGPTNPMNSALGNGLSPQVMGLLNPGGVPHQPQSDYAISPLTGGLE
PPSGMAASCSQRMDHIKGLEGLSSVPSMSALPSLPSSQSYCTPSYSSPGYTVDHVASYQY
SQYGQSALPYLRPEIT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgttggcggggtcagtacccaggatgatgcgacccacgctggctcagaactac
ccccgcagcggcttcccactggaagtgtctaccccgctgggtcaaggccgagtcaaccag
ctcggaggggttttcatcaacggcagacctctgcccaaccacatccgacacaagatcgtg
gagatggcccaccacgggatcaggccgtgcgtcatctcccgacagctccgggtctcccac
ggctgcgtgtccaaaattctgtgcaggtaccaggagacgggctcgatcagacccggagcc
atcggaggcagcaaacccaagcagggaacaacgccggacgtcgagaggagaatagaggaa
tacaagcgggaaaacccgggtatgtttagctgggagattcgggataaattactgaaggat
gggatatgtgaccgcaacaacgttccttcagtgagctccatcagtcgcatcatgaggact
aagtttggggggaaaggtgaggaagaagaagaggaagacgagatcgagaagaaggagctg
gaggacagtgaacggagagccaaacacagcattgaaggcatcttgggagacagatcaagt
cactcagacgaaggctccgacgtggagtcggagcccgatctgccactgaagaggaaacag
cggcgcagtcggaccaccttcacagccgagcagctggaggagctggagagggccttcgag
agaacccactacccagacatctacaccagggaggagctggctcagagggccaagctcact
gaagccagggtacaggtgtggttcagcaacaggcgagcgaggtggaggaagcaagctgga
gccaatcagctgatggcattcaaccacctgatcccgggtggattcccccccacagccatg
tccagcatcccaccgtaccagctctctgacagcacctactccccatcatctatagcacag
gtgtcggagcctcccagcacggtgcaccgtccccagcccctgcctccttcctccggccat
caggcctccgctggcggagtgcaggcagacggcggctctgcttactgcctcgcctccgga
cgtcactccttctcaggctactcggacagctttgtgagcccaggagggccgacaaatccc
atgaactccgcattaggaaacggcctctctccacaggtgatgggtttgctgaacccaggc
ggcgtgccacaccagccccaaagcgactacgccatctcccccctgacaggcggcctggag
ccccccagtggcatggccgccagctgcagccaacgcatggaccacatcaagggtctggag
ggtctctccagtgttccctccatgtcagcactgccctccctgcccagctcccagtcttac
tgcaccccatcctacagctcaccaggctacacagtggaccacgtcgcgtcctaccagtac
agccagtacgggcaaagtgcccttccttatttgaggcctgagatcacctga
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