Xiphophorus hellerii (green swordtail): 116708146
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Entry
116708146 CDS
T07363
Symbol
vtn
Name
(RefSeq) vitronectin isoform X1
KO
K06251
vitronectin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04510
Focal adhesion
xhe04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116708146 (vtn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116708146 (vtn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116708146 (vtn)
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116708146 (vtn)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116708146 (vtn)
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116708146 (vtn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
116708146
NCBI-ProteinID:
XP_032401852
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Position
18:21250657..21256826
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AA seq
580 aa
AA seq
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MFPITGAHGLSLPPQSACWQNRDSMKLCLILLLSLSAKAFTEEIFTESCLDQCENGFQAQ
RKCQCDSMCKYYKSCCSDYEAICGMTTRGDTFVFAEDDDDDLFGSTTPTPKGPADVASTQ
PPVSDFNQRLHRPPETNLKKMTKPPWLVNQRVTPESQLAATTGAPQAPSATTTAPKTTLA
TTMATTTVGVTTAAPDPDAEVCSGRPFGSFMQLKNGSIYAFRGEYFFEMDQKSVLPGYPK
LIKDVWGISGPIDAAFTRINCQGKTYIFKGNKYWRFDEGILEDDYPRDISVGFDKIPDHV
DAAFALPAHSHHGKEKVYFFKGDQYYVYEFLHQPSHEECAAMSERSPSTLFRRYTDLYYS
NYERYFSELFSDLPQHHDKHHFINKDWKGLKSPVDAAMAGRIYVAPLGSSSRPDQQWGQQ
YQQNGWQRGRRRQNRSPSWGSMAEQGMGMGQGFAERGMEMGLRLAERRMEMEERLGRDRD
RRRDRDWDLDRRWNQDWDQNRRWDRDWDRYNQNNRGNYDTRNDRFFQGEMPIQSVYFFKA
DKYYRVDLRTKRVDPAMPPYPRSIAKYWLGCPNPSGAEKK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaataaccggagcacatggtttatcattacctcctcagtctgcctgctggcag
aacagagacagcatgaagttgtgtttaatcctcctgctctctctgagcgccaaggccttc
actgaggagatcttcactgagtcttgtctggaccaatgtgaaaacggctttcaggctcag
aggaagtgccagtgcgactccatgtgcaagtattacaaaagctgctgctctgactatgag
gccatctgtggcatgacgactcgtggcgacacgtttgtgtttgcagaggacgacgacgat
gatttgtttggaagcaccactccaaccccaaaaggtcccgctgatgttgcatccacccag
cctcctgtctcagacttcaaccaaagactgcatcgacctccagagaccaatctgaaaaaa
atgaccaaacctccatggctggtgaaccaaagagtgactcccgaaagtcagctcgctgcc
acgactggagctcctcaggctccttcagccaccaccactgctcccaaaaccacactggcc
accacaatggccaccaccactgttggcgtcaccacagcagctcctgacccagatgctgag
gtctgcagtgggaggccctttggctccttcatgcagcttaaaaacggctccatctatgcc
ttcagaggggagtacttctttgagatggaccagaagtcggttcttcctggttacccaaag
ctgataaaagatgtgtggggcatcagcgggccaatcgacgctgcattcactcgcatcaac
tgtcaggggaagacctacatttttaagggaaacaagtactggaggtttgatgagggcatc
ctggaggacgattatccacgggacatcagcgttggctttgacaagattcctgaccatgtg
gatgcagcgttcgcccttcctgctcacagccaccacggaaaagagaaagtttacttcttc
aaaggtgaccagtactatgtgtacgagtttttgcaccaaccctcccacgaggagtgtgcc
gccatgtctgagaggtctccatccacgctgttcaggcgctacactgatctgtactacagc
aactatgagcgatacttcagcgaacttttctctgacttgcctcagcatcacgacaagcat
cacttcatcaacaaagactggaaaggcctcaagtctccagtggatgctgccatggccggc
aggatctacgtcgctcctttggggtcgtcgtcccggcccgaccagcagtgggggcagcag
taccagcagaacggatggcagagaggtcggaggcgacagaaccggtctccttcctggggg
tccatggccgagcagggcatgggcatgggccaggggtttgctgagaggggcatggagatg
ggtctgagattggcagagaggaggatggagatggaggagaggctgggccgggaccgggac
aggcggcgggatcgggactgggacctggacagacgatggaatcaggactgggaccagaac
agaaggtgggaccgggactgggaccgttacaaccagaacaatagaggcaactacgacacc
aggaatgatcgattcttccagggagaaatgcccatccagagcgtttacttctttaaagca
gataaatactacagagttgacctgaggaccaaaagagttgaccctgctatgcctccgtac
cccagatccatcgccaagtactggctcggctgtccaaacccatctggggcagagaagaag
tag
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