KEGG   Xiphophorus hellerii (green swordtail): 116708152
Entry
116708152         CDS       T07363                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe00565  Ether lipid metabolism
xhe01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    116708152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xhe03036]
    116708152
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xhe04147]
    116708152
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    116708152
Exosome [BR:xhe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116708152
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_EML Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_DCAF4 WDR90_beta-prop_4th WD40_RFWD3 LisH Beta-prop_SPT8 Beta-prop_RIG_2nd LisH_PAC1 Beta-prop_DCAF12 Beta-prop_IFT140_1st eIF2A Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd DUF2570 ARMC9_LisH LisH_2 SutA-RBD
Other DBs
NCBI-GeneID: 116708152
NCBI-ProteinID: XP_032401866
LinkDB
Position
18:21383784..21420114
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDNNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVSQKRDPKEWIPRPPERYALSGHRNPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILDATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGILFHPGGKFIVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKAAPFVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacaacggcaacgagacgaactaaatcgagcaatagccgattatctacgt
tccaatggatacgaagaggcttactccactttcaagaaggaagcggaattagataataat
gaagaactggataagaagtacgctggccttttggaaaaaaaatggacctcagtcatcaga
ttacaaaagaaggtgatggagcttgaatcgaagctgaacgaagcaaaagaggaaatcacc
ctgggtggaccagtcagtcagaagcgtgaccccaaagagtggatcccgcgtccgcctgaa
agatacgcgctgagcggccaccgcaaccccgtcacccgcgtcatcttccacccagtcttc
agcgtcatggtgtcggcctctgaggacgcaacaataaaggtgtgggactacgagacagga
gactttgaacgcacactgaaaggccacacagattctgttcaggacatctcattcgaccag
accggcaagctgctggcatcctgctctgcagacatgactatcaaactgtgggacttccaa
ggcttcgagtgcatcaggaccatgcacggacatgaccacaatgtttcatctgtagccatc
atgcccaatggagatcacattgtttctgcctccagggacaaaaccattaaaatgtgggaa
gtggcaactggatactgtgtgaagaccttcacgggccacagggagtgggttcgtatggtg
cggcccaaccaggacggcacgctgatcgccagctgctccaacgatcagacggtccgtgtt
tgggtcgtggccaccaaagaatgcaaggcggagctgcgggagcacgaacacgtggtggag
tgcatctcctgggctccagagagcgcacaccccaccatcctagacgccacaggctctgag
accaagaagagtggaaagcctgggccttttctgctgtctggttccagagacaaaactata
aagatgtgggacgtaagcactgggatgtgcctgatgacactggttggacatgataactgg
gtgcgtggcatcctcttccaccctggaggaaagtttatagtgagctgtgcggatgacaag
accttaaggatctgggactacaagaacaagcgctgcatgaaaaccctgagtgcccatgaa
cactttgttacctctctggatttccacaaggctgcgcccttcgtggtcactggcagcgta
gatcaaacagtaaaagtttgggagtgtcgctga

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