Xiphophorus hellerii (green swordtail): 116708156
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Entry
116708156 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Va-like
KO
K10357
myosin V
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116708156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116708156
04131 Membrane trafficking [BR:
xhe04131
]
116708156
03029 Mitochondrial biogenesis [BR:
xhe03029
]
116708156
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116708156
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116708156
mRNA cycle factors
P-body specific factors
116708156
Membrane trafficking [BR:
xhe04131
]
Others
Actin-binding proteins
Myosins
116708156
Mitochondrial biogenesis [BR:
xhe03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116708156
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116708156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
AAA_22
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
116708156
NCBI-ProteinID:
XP_032401877
LinkDB
All DBs
Position
2:7080909..7106132
Genome browser
AA seq
1821 aa
AA seq
DB search
MAAFELYSKNAHVWLPDAAEVWKSAELLKDYTPGDLTLSLQLEDGTVVEHNVDPKTKNLP
PLRNPNILVGENDLTTLSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYESLPIYE
ADIINAYSGQNMGDMDPHIFAVAEEAYKQMARDQINQSIIVSGESGAGKTVSAKYAMRYF
ATVSSSSEETNVEKRVLASNPIMEAFGNAKTTRNDNSSRFGKYIEIGFNKDHCIVGANMR
TYLLEKSRVVFQARGERNYHIFYQLCASSHLSEFKAFKLGCADDFCCTNQGQGSVIDGVN
DAKEMCNTRRAFSLLGIGESDQVKIYQILSAILHLSNVDVKDQSSDTCSILPDNAHLMVF
CELMGVPCEEMAHWLCHRKLQTITETFVKPVSKENAVHGRDALAKHIYAKLFGWIVNNIN
NALESTVKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
EIPWTLIDFCDNKPCINLIEAKLGILDLLDEECRMPKGSDDTWAQKLYNTHLKQNAYFDK
PRLSNEAFIIHHFADEVEYQCVGFLEKNKDTVNEEQINVLKKSKFGLLPKLFEDEEKIKA
PTSKISSNSGRPGKSQKEHKKTVGLQFRQSLYLLMDTLNATSPHYVRCIKPNDRKAPFTL
DPIRAVQQLRACGVLETIRISAAGFPSRWTYQEFFGRYRVLMKQKDVLPDRKQTCRNLLE
KLIKDQQKYQFGKNKIFFRAGQVAYLEKLRSDRLRSACVAIQKTIRCWLARKKYLRMRES
AIVIQKHVRAQQARSYVKFLRQTKAAIVVQRNVRMWSKKRHFLQQRSAAVTVQRVWRGCL
ARKHYFKLLYEQKAVVIQRMARGWLARQRFRRAMEAVVLLQSCVRRMSAKKELKKLKVEA
RSVEHFKNLNIGMENKIMQLQHKINEQHKENRELTERLSVLEKTHTTEREKQCREIENLR
SSEQEARAKAETVPSLLEQLSFLQEELENTHREKEHQEEQTKLYKEQTQQIIHELNMKNS
LLNSNLEELNEEFSIQAQQLAEIKTNLENTKQLEKDFTEERSRYQSLLSKHLQLEERHKD
LKEEMNVTIISNQSSHQRTDSNYSSNSSEFSQILSSTEDEDSAIQAEDEIETKVDLPILL
KLQKRVKELEGENRSLWKKLDKKEEAQQEKAKELEMQTTFGRTELDVEKLKRQELESENK
KLKQNLNELRKSLTSENSDLAPPAAGTLAYNILLEQLSSSNEELELRKEEVLLLRSHMVR
QEALKHKDSVLGESVKLDLGEIHSLQDSDRSTNIHTLNEDGELWLAYEGLKETNRLLETQ
MQEQECLHNEKYRKLNEEMNKLRAEKEHQQKLLAMSLLLPEDARIDASLKHEITRLTTEN
LERMEQQQKQDKTIRKLKKQLKLYMKKVEDLEANAHQTVSSSGTSMPVRPVHIARKEKEF
QGMLEFKEDDTGHLLKNLVVDLKPRGVAVSFTPGLPAFIIFMCLRYADNVNDDRRLSTLL
NSTISSIKGVIKRKGNDFEVVSFWLANTCRLMHCLKQYSGDEVFMVHNTAKQNEQCLANF
ELTEYHQLFGDLAIQIYRQIIKSMENILLPLIIPCMLEHEAEQGVLGSKPTGLRKRSPSF
PDEALTVEVLLQRLSFFHTTMSQHGMDSDIIKQVVKQQFYIISAVTLNNLLLRKDMCSWG
KGLQIRYNVWQLDEWLGEKELSDCGAKETLEPLIQAAQLLQINKNTEADAKAICSMCSSL
TTAQIVKILTLYTPVIEFEERVSNTFITTIKNLLKDRAESSNLMMDAKKIFSVSFPFTPS
SVALETIQIPASLNLGFLTRV
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttttgaactttactccaagaatgcccatgtttggctcccagatgcagcagaa
gtgtggaagtctgctgagcttctcaaagactacactcctggtgacctgacgctgtctcta
caactggaggatggcacggttgtggagcacaatgttgaccccaaaaccaaaaacctgccc
cctctcagaaaccccaacatcctggtgggagaaaatgacctcacaactctcagttacctc
catgagccagcagtgctacacaaccttaaagtgcgctttattgactccaagctgatttac
acctactgtggaatcgtcctggttgccatcaatccctatgagagtctgcccatctatgaa
gctgatatcatcaacgcctacagtgggcaaaacatgggagacatggacccacatatcttt
gcagtagctgaggaagcatacaaacaaatggccagagatcaaataaatcagtccataata
gtcagcggggagtctggtgcaggcaaaacggtttccgctaaatacgccatgcgttacttc
gccacagtcagcagctcatcggaggagaccaacgttgagaagagagttcttgcttctaat
ccaatcatggaggcctttgggaatgccaagacaacaagaaatgacaacagcagccgcttt
gggaaatacattgagatcgggtttaacaaggatcactgcatagtcggggctaacatgagg
acctacttactggaaaagtctagagtagtgtttcaggctcgcggagaaagaaactaccat
attttttaccagctatgtgcctcttcacatctgtctgagtttaaggccttcaaattaggc
tgtgcagatgacttctgctgcactaaccagggtcagggttcagtcatcgatggagtcaat
gatgccaaagagatgtgcaacaccaggagggcgttctcactattaggaattggtgaaagt
gatcaagtgaaaatttaccagattctttcagctattctccatcttagcaacgtggatgta
aaagatcagtcatctgacacatgcagcatcctgccagataatgcccacctgatggtcttc
tgtgagctcatgggagttccttgtgaagaaatggcccactggttatgccataggaaactc
cagacgatcacggaaacctttgtgaagcctgtttccaaagagaatgcagtccatggaagg
gatgcactggccaaacatatttatgccaaactcttcggctggatcgtgaacaacattaac
aatgcgctggaatctacagtgaaacaacactcatttatcggtgtgctcgacatttatggg
tttgagacatttgatgtcaacagctttgagcagttttgtatcaactatgccaatgaaaag
cttcagcagcagttcaacctgcatgtcttcaagctggaacaagaagagtacatgaaggag
gagattccctggacgttaatcgacttctgtgacaacaagccgtgcattaatctcatcgag
gccaagcttggcatcctggaccttctggacgaggagtgcagaatgcccaaaggttctgac
gacacatgggctcagaaactgtacaacacccacctgaagcagaatgcttattttgataaa
cccaggttatcaaacgaagctttcatcattcaccactttgctgacgaggtggagtaccag
tgtgtcggattcctggagaaaaataaggacactgtcaacgaggaacagattaatgtgctt
aaaaagagcaagtttggtttgctgccgaaactgtttgaggatgaagaaaaaataaaagcg
ccaactagcaagatttctagtaacagtggaagacctgggaagtctcaaaaggaacataag
aaaactgtcggactgcagtttcgacagtctctatacttgcttatggacacactaaatgca
acatcgcctcattatgttcgctgcatcaaaccgaatgaccgtaaagctccattcactctg
gacccaataagagccgtgcagcagcttcgagcatgtggcgtcctggaaacgatccgtatc
tctgcagcaggattcccatctagatggacctatcaggaatttttcggtcgttatcgggtc
ctgatgaaacaaaaggatgttctgcctgatagaaaacaaacctgcagaaacctcctggaa
aaacttatcaaggaccaacagaagtaccagtttggcaaaaacaagatcttcttcagggct
ggccaggtggcttacctggagaagctgcgttcggacagactgcgttcagcttgtgtcgcc
atccagaagacaatccgctgctggctcgcccgcaaaaagtatctgaggatgagagagtcc
gccatcgtgattcagaagcatgtacgggctcagcaggcacgcagttatgtcaagtttctg
cggcagaccaaagcagctattgttgttcagcgcaatgtgcgaatgtggtctaaaaagaga
catttcctgcagcagcgctctgcagctgtcactgttcagcgtgtttggaggggctgtttg
gctaggaagcattacttcaagttgctgtatgagcagaaggctgtggtgattcagaggatg
gcgagaggctggttggccaggcagcgtttccggcgcgcaatggaggccgtcgtcctgctg
cagagctgtgtgcgccgcatgagtgccaagaaagaattgaagaagctaaaagtggaggca
cgctcagtggagcacttcaagaacctcaacattgggatggagaacaagatcatgcagtta
cagcacaagataaacgagcaacacaaagaaaacagagagctcacagagaggctcagtgtt
ctggagaagacccacactactgagagggagaaacagtgcagagagatagaaaacctgcgc
tcttcagagcaagaggccagagccaaagcagagacggttccctcgctgctggagcagctg
tccttccttcaggaggagctggaaaacacccacagagagaaggagcaccaggaggagcag
acaaagctctacaaagagcaaacgcaacagataatccatgaactgaatatgaagaacagc
ttgttaaatagcaacttagaagaactaaacgaggaattctccatacaagctcagcagttg
gcagaaattaaaaccaacttggagaacaccaaacagctggagaaggactttacagaagag
cgctctcgctaccaaagtctcctcagcaagcatctgcagctggaggaacggcacaaggac
ctcaaggaggagatgaacgtcaccataatttcaaaccagtctagtcaccagaggacagac
tccaactacagcagtaactcatctgagttttctcaaatcctgagctccactgaagatgaa
gacagcgccattcaagcagaggatgagatcgagactaaagtggacctgcccattcttcta
aagcttcagaaaagggtgaaggagctggagggagaaaatcgatctttatggaaaaagctg
gataaaaaagaggaggcccagcaagaaaaggcaaaagaactggagatgcagacaactttt
ggcaggacagaactggacgtagaaaaattgaagcggcaagagctggagtctgagaacaag
aaactgaagcagaatctgaatgagctgcggaagtctctgaccagcgagaatagcgatttg
gcgccccctgctgctggtactttggcttataacattctgctggaacaactcagttcttcc
aacgaggagctggagctgcgtaaagaggaggtgttgctcctccgttcacatatggtccgt
caggaagctcttaaacacaaggattctgtacttggagaaagtgtgaaactggatctcggt
gaaatccactcattacaagattctgacaggtccactaatattcataccctgaatgaagat
ggagagctgtggcttgcttatgaaggcttgaaagagacaaataggcttctggagacccag
atgcaggagcaggagtgtcttcacaatgagaagtacaggaagctgaatgaggagatgaac
aaactgagggctgaaaaggagcatcaacaaaagctgctggctatgagcctgcttctaccc
gaagatgcccgaatagacgcaagcctgaagcacgagataacacgactcaccactgagaat
ctggagcgaatggagcaacaacagaaacaagataaaacaatacgcaaattgaaaaagcaa
cttaagctctatatgaaaaaagtagaagatttagaagcgaacgctcaccagacagttagc
tcttctgggacgagcatgcctgtccgaccggtgcacatcgcacgcaaggagaaggagttc
cagggcatgttggagttcaaggaggacgacacgggtcatttgctgaagaacctggtcgta
gatctgaagcctcgtggcgtcgcagtcagcttcactccagggcttcctgccttcatcatc
ttcatgtgccttcgatatgcagacaatgtgaacgacgacaggagactcagcacactcctc
aattctacaatcagcagcatcaaaggcgtcatcaagagaaaaggaaatgattttgaagtg
gtgtcgttctggctggccaacacgtgccggttaatgcactgtctgaagcagtacagtgga
gatgaggtgtttatggtgcacaacactgctaagcagaatgagcagtgcctggctaatttt
gagctgacagagtaccatcagctttttggtgacctggccattcaaatctaccgtcagatc
atcaaaagcatggagaacatcctgctacccctgataataccatgcatgctggagcatgag
gcagagcagggagttttaggctccaaaccaacaggcctgaggaagaggagccccagcttc
cctgatgaagctttgacagtggaagtcctcctgcaacgtctcagcttcttccacaccacc
atgagtcaacacgggatggactctgacatcatcaaacaggtggtcaaacagcagttttac
atcatcagcgccgttactcttaacaatctgctgctgaggaaagacatgtgctcgtggggt
aaaggcctacagatcaggtacaacgtttggcagctggatgagtggctgggagagaaggag
ctgagcgactgtggagcgaaggaaactctggagcctctcattcaggctgcacagctttta
cagatcaataaaaacactgaagctgatgccaaagcaatctgtagcatgtgctcctccctc
accacagcacagattgttaaaatcctgacgttgtacactccagtgattgagtttgaagaa
agagtatcaaacacattcatcaccaccattaaaaaccttttgaaagacagagctgagtcg
tccaacttgatgatggacgccaagaaaatattctccgtctcattcccgttcacgccttcc
tctgtggctctggagaccatccagatccccgcaagcctcaacctgggcttccttacacgt
gtctag
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integrated database retrieval system
