Xiphophorus hellerii (green swordtail): 116708186
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Entry
116708186 CDS
T07363
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116708186 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116708186 (dhx36)
03012 Translation factors [BR:
xhe03012
]
116708186 (dhx36)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116708186 (dhx36)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116708186 (dhx36)
Translation factors [BR:
xhe03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116708186 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
HA2_N
nSTAND3
ATPase
NPHP3_N
AAA_19
AAA_16
Motif
Other DBs
NCBI-GeneID:
116708186
NCBI-ProteinID:
XP_032401906
LinkDB
All DBs
Position
18:complement(26154900..26194274)
Genome browser
AA seq
1069 aa
AA seq
DB search
MSYGYGGGGGRRSRKGDRGSRDGSRERLDRGGGGGGGGGGGGRGFRGHGSDFDQDRGAGG
GQRDRPPPHLRGRDIGLWYARYGAVRRKQADRRSRAMVHMDEAREEHITKLLNSVQRDPT
RDSRDAPSSVSDAWRTAASSSGHCYFDGDMPEEEKQKLEEEEDSSSKQKKTSRTSQRDSS
TAAKDEPPENWDADDEDDVEKEKTLSERKDLEFLFQEVVRDASVDEDLKRDLQSKKTDRN
YKEMLKFREKLPSYGKKEDLVRLINSNRVLVVSGETGCGKTTQVTQFILDDHIRRGRGST
CRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIIL
QWLRSDPLLSSVSHLVLDEIHERNLQSDVLLVIVKELLNLRDDLKVILMSATLNAEKFSK
YFDKCPMIHIPGLAFPVEEFLLEDIIEMTRYRPQNQDRRPAWKRRFWQGHQSRSEKEEKE
EEYKESWPCYARTLQGRYSDGTIEAVEMLDTDEKIDLELILALIRHIVLNEGEGAILVFL
PGWDNISSLNDLLTAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAE
TSITIDDVVYVIDGGKIKETNFDTDNNISTMTAEWVSLANAKQRKGRAGRVQPGKCYHLY
NGLRASLLEAYQLPEIMRTPLEELCLQIKILKLGSISRFLEKALDPPSEKAVNLAIKSLT
DLNALDHAENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPL
GKEKMADMRRRTLSRNSKSDHLTIVYAFKGWEEAKQRGSRYERDYCWDNFLSANTLQMLH
NMKGQFAEHLMSAGFVSSRDPKDAKSNVNSDNEKLIKAVIVAGLYPKVAMIRPSYSKKRP
GVKVYTQTDGKVCIHPKSVNAEEREFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGG
DITIQKDEGQETVAVDRWIVFRSPARIAHLVKSLKRELDSLLQDKISNPAPVDWENRQSK
DCAVITAIIDLITTQERPAGGSKDDGRTWASAPSGRHSYFDDDDDDDDD
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggctacggcggtggaggtggaagaagaagcagaaagggagacagagggtcc
agggatgggagcagagagagactggacagaggaggaggaggaggaggtggtggtggtggc
ggtgggagaggtttcagaggacacggttccgacttcgaccaggaccgaggagcaggagga
ggtcagagggaccgtcctcctccacacctgaggggccgggacattggtttgtggtacgcg
cggtatggagcagtgaggaggaaacaagcggaccgcagatcgcgggccatggtccacatg
gacgaagccagagaggaacacatcaccaagctcctcaactctgtccagagagacccaaca
agagacagcagggacgcaccgtcctcagtgtctgacgcctggcggacagcagccagcagc
agcggccactgttactttgacggggatatgcctgaagaagagaagcagaaattggaggaa
gaggaagacagttcttcgaaacagaagaaaacaagccgcacatctcaacgtgactcctct
acagcagctaaagatgaacctccagaaaactgggacgcagatgatgaggatgacgtggag
aaagaaaaaacactgagcgaacgcaaggatctggagttcttatttcaggaagtagtcaga
gacgcatcagtggatgaggacttgaaaagagatttgcaaagcaaaaaaacggatcgaaat
tacaaagaaatgttgaaattcagggaaaaactaccatcatatggaaagaaagaggatctg
gtgcggctcatcaactcgaaccgcgtcttggtggttagcggggagacggggtgcggaaag
accactcaggtcacccagttcatcctggacgaccacatcagaagaggccggggctcgacg
tgccgcgtggtctgcacgcagccccgccgcatcagcgccatctccgtagcagagcgtgta
gctgcagagagagcagaaagtgtaggaaatggaaattcctgtggttaccaaatacgcctg
cagagccggttaccacggagacaaggttcaatactgtactgtacaacaggaattattctt
cagtggctccgctctgatccgttgttatccagtgtcagtcaccttgtgctggacgagatc
cacgaaagaaaccttcagtcagacgttttgctcgtcatcgtgaaggaattactcaacctc
cgagatgatctcaaggtcatcctgatgagtgccaccctcaacgcagaaaagttctctaaa
tattttgacaaatgtccaatgatccacatccctgggttagcattcccagtggaagaattc
ctacttgaagacatcattgagatgaccagatatcgtccgcagaatcaggatcgtcggcct
gcgtggaagagacgcttttggcagggccaccaatccagatcggagaaggaggagaaggag
gaggaatataaggagagctggccatgttacgcacgaacgctgcagggcagatactctgac
ggcacaatcgaggcggtggagatgttagacactgatgagaagattgatctggagctgatc
ctggcgctgatccggcacattgtgctcaacgagggggagggagcaatcttggttttcctg
cccggctgggacaacattagcagtctcaatgacctcctcacggcgcagcaaatgttccga
tcagataggttcgtcatcatccctctgcactccctcatgcccactgttaatcagacgcag
gttttcaaaagacccccgccaggagtcagaaagattgtgattgcaaccaatatcgcggag
accagcatcaccatagatgatgtcgtttatgtgatagatggaggaaagattaaggagacc
aacttcgacaccgacaacaacatcagcaccatgacggccgagtgggttagcttggccaac
gccaaacagaggaaaggacgtgctggcagggtgcaaccaggaaagtgctatcatctgtac
aatgggcttagggccagcctgctggaagcctatcaattacctgaaattatgaggacaccg
ctggaggagctctgcttgcagataaagattctgaagctcggctccattagtcgatttctg
gagaaggccttggacccgccgagcgagaaggcagttaacctcgccatcaagagcctcaca
gacctgaacgctctggaccacgcagagaatctgacagctctgggtttccacctggcacgt
ctccccgtggagccgcacattggcaagctgatcctgttcggcgctctgttgggatgcctc
gaccccgtactcaccatcgccgcttcgctcagcttcaaagaccctttcttcatacccctg
ggtaaagagaagatggcagacatgaggagaaggactctgtccagaaactcaaagagtgac
cacctcactattgtttacgccttcaagggatgggaggaagccaagcagcgggggtccagg
tatgagagggattactgctgggacaacttcctgtctgccaacacactccagatgctgcac
aacatgaaaggtcagtttgccgaacatctcatgagtgctggctttgtcagcagccgggat
cccaaagacgccaaatccaatgtcaactcggataatgagaagttgatcaaggcagtgatt
gttgctggactgtaccctaaggtggccatgatccgaccctcttacagcaaaaagagacct
ggggtaaaggtgtacacccagaccgacggaaaggtgtgtatccatcccaaatctgtcaac
gctgaagagagggaattcaactacacatggctcatttaccacctgaagatgagaaccagc
agcatcttcctgtacgactgcaccgaggtgtccccgttctcgctgctgttcttcggggga
gacatcaccatccagaaagacgagggccaggagaccgtcgcggtcgaccgctggatcgtc
ttcaggtccccagcgcgcatcgctcatctcgtaaagagtttgaagagagagctggactcg
ctgttgcaagacaaaatcagtaacccggctcctgtggattgggagaaccgccagtccaag
gactgcgctgtcatcacggccatcatagacctcatcactacgcaggaaaggcctgcaggc
ggcagcaaggacgacggcaggacgtgggcgtctgcccccagcggaaggcactcttacttt
gatgatgacgatgacgacgacgacgattaa
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