Xiphophorus hellerii (green swordtail): 116708216
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Entry
116708216 CDS
T07363
Symbol
lrrk2
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat serine/threonine-protein kinase 2
KO
K08844
leucine-rich repeat kinase 2 [EC:
2.7.11.1
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xhe01001
]
116708216 (lrrk2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116708216 (lrrk2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116708216 (lrrk2)
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116708216 (lrrk2)
Protein kinases [BR:
xhe01001
]
Serine/threonine kinases: TKL group
LRRK family
116708216 (lrrk2)
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
116708216 (lrrk2)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116708216 (lrrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_LRRK2
Beta-prop_LRRK2
ANK_LRRK2
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
Roc
COR-A
Ras
LRR_14
COR-B
Beta-prop_RSE1_2nd
LRR_NXF1-5
Ank_3
Ank_2
WDR55
TniB
Beta-prop_EML_2
Ank_4
Beta-prop_THOC3
G-alpha
Arf
MMR_HSR1
SRPRB
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
116708216
NCBI-ProteinID:
XP_032401957
LinkDB
All DBs
Position
2:complement(29499688..29538869)
Genome browser
AA seq
2550 aa
AA seq
DB search
MVNKEELEGRLKKLLVRLKTPQEDRQLSTLIQILQDLRSLAATEHAAELFEDKDVHVPLT
VVLSSYTNSKKVQEVGLSLLCRLIEIWPNTLEELCRPLQASREWEVLAVHQQILKVLSKF
IADRQVTIVGLRALALLLTSDPIPLLVLDEEEDVFSLVVQAMKAFPTIEEVQLQGCRALQ
LLLDRVSDDHLGEFVENQDHVVVLSALQRFSNSPKLLTQAMKVLLPLARTGSNVEVLMSG
GTRCYAVIIAAMDAFPVVAELQETACLLFRRFTSESFYDILVRNGVQRVALRACQSFPNN
PVLQAAALSCLAELTATIVQSKAVAEKGRKEEERGTEEVEDVGLDWMEDCCTALDLHAAE
PAVQEAASWAIHNLLLHGAQVNPSEEEQDGRTPVHRQLMAAMLVHSSSPSVFIAATSAIA
TLITNNSKMSFLLLSGGLHVNLVEMMKRHASSAEVSISACKLLKLLFHRRTASLDELNMA
MNQILTTMKMHNFQSEVQLAALEASLIFLCPDRSLRENGSSIADPDMADVSLRVLKNQCV
VEGAHTLYLEALNRFISRPAIQQCGLKVLSFLADCSGAVDLLCQQGAIDTVLHTLHAFPE
DRGISYWGLTLLNYLVTKKKLSRMIVPVLASVVVASLSQYKEDSEMVLKCFQVALRMLDA
CSGAAAELQREDFDRQIFQHLVQEREQSVSPLRKAVCLALSKMWSDSELHYSMLEKACMD
GNTLMAECLIELGADINRKAKTESLIYQVCEKGGPLELVELLVSRGAPEQQLRRALAVSL
KSADGPIVILLLSRLGLDFNNSALCLGGFRLGRLDAAWLSPLLAERGRAYSLRYSSKGVD
LARYIQSLQRSKSVGGFSRPMSDQCLTSGYISDESDDSSFSAVSMDDSLFMNDEIESDGS
DPVSGTLSPKSKNNSVEELRGDSFKRKQGRHRHSSAESPQPENENNESTNIRCVRRNSKP
VLGSGENSAALFKERERIRLLDLSGNELDSLSCFLDDALVQQQLWHVHRLDLSSNVLLDF
PSAICQSLKSLTRLDLQGNQLRSLPDDLLALPSLSTLNVSRNCIGPVLTFDPAVTCPSLR
QLNLSFNKITTFPYELGRTMGKLEELFMDGNGLTELCSALYLPEVKLLDVSKNNVENISP
DFLTTCPKLETLNASNNKICSLSQLPAKVTTLKLANNKFTHVPEAILNLPNLRSVDMRTN
TIDVLPGPGCWVSHNIRELMFSQNDIKGLDLSGPIFRWARLEKLHLSDNKLKEIPPQIGI
LEGLNSLDVSRNARLRSFPDEMGKLGRLWDLPLDGLRLDLDLKLIGNKTKDIVRFLQHRL
KKAVPYHRMKLIVVGTTSCGKSSLVRQLMKMKRSQLNSKQSAVDVFDWTVKKMLLNVWDF
SGGEELTGSHPLFLTSRALYLVVYDLSKGPSQVDALKPWLFNIKAVAPLSPVILVGTHTD
VSEELQIQSCLSKIREELLNHQGFPAIRDCHMVSLCEDPDSIAKLRRAVIREVTNFKIQG
QQVMGQLVPDCYVELERRILQERSRVPPEFPILRYDKLLQLIQESQLQLEEAELPHAIHF
LSEVGILLHFGDPALQLQELYFIDPQWLCNILSQKLTLKSCGLLEQPKGVVQRSVVERFL
LETKCFPKSHMLQFFKLLEKFQIALSFGEDQLLVPSSLSKHRPVIELPHCENSEMIVRLY
EMPYFPMDFWSRQISRLLEVSSYLLCGREKVLRPNLIYWRRGIYLNWSHDAYCLMEATSE
EQSPSSFVRITVPSSQKGRVLLGQVVDHVDSVLEEWFSGLLNTDMHGNGEALLKKWALYS
FEDGQEWSKILLEDLCNHFDEDFLMVNPENPRCKLLISQIAPDLVLSDQPAGISLDGEEL
EVDLSKEHRLGDGGFGTVYRGIYKTEEVAVKVFNKHASDLYVHRLLRQELVVLGRLRHPS
LVSLLAAGSAPPVLVMELAHRGSLDSLFNHENGSLNQKLQHRIALHVADGLRYLHTAMII
YRDLKPHNVLLFNLKSDSEIIAKITDYGIAQYCCSMGVRSSEGTPGFRAPEVARGNVIYN
QQADMFSFGLLLYDLLTRGERISEGMKFPSEFDEVAVQGKLPDPVKHYGCSPWLSFQALM
MDCLKESPQDRPTSAQVFDRLNSGEMLSLISEVKLSGMFTAQCITMSSGGAATGGDQKTS
SHTAWLGGGSSSKRKGYITAVDLHTNVVTTQEVDTSPVLCLVTVQIPNEEFDWLVAGMQS
GSLLVISTQDVSTYHHLQSVTDAVTSLYFHVHPRRTQRTNYLLVGTADGVLSVYEESVLM
RENGQPVKSVTVGNGSTPLMCLGQSTHSLDSRTVWAGCGTKILCFSADYDVCKFIDTKPN
LIFRQQRGQSSEACVSLMVVDRHVYLSKASTPTVEVWDKKSERMVDCIDCAQIIRRGGGV
EPLSEASPSWATVKTLMMQNTAALWIGTRGGYLLLLELSKHQALQVVAPSCGSIRAIVPA
VIQSMNWKNAVLVLGRRLPRDRNRDDEESVLMAWSSTLPQEVKDLKKHCEKRERAAARMR
EQLHHAWAAEESVKGMNSSAALKRMFYLSA
NT seq
7653 nt
NT seq
+upstream
nt +downstream
nt
atggttaacaaagaagagctggaaggaaggctgaagaagctgctggtgcggctgaaaacc
ccgcaggaggacaggcagctgtccacgctgatccaaatcctgcaggatctgcggtccctg
gcggcgacggaacatgcggctgagctgtttgaagacaaggatgtccatgttcccctcaca
gtggtgctttcatcttatacaaacagcaaaaaagtccaggaggtgggcttgtcactgctg
tgccggctcattgaaatatggccgaacacgctggaggagctttgcagacctctgcaggcc
agcagggagtgggaggtactggcagttcaccagcagatcctgaaggtcttatctaagttt
attgcagatcgtcaagtaaccattgttggactcagagccctggcgcttctgctcacatca
gatccgattcctctgctggtgctggatgaagaagaggatgtatttagcttggtcgtgcag
gcgatgaaggcatttcccaccattgaggaagttcaactccaaggttgtagggctttgcag
ctgctgctggacagagtaagtgacgaccatctgggcgagtttgtggaaaaccaggaccat
gttgtggttctctcagctctgcagaggttctctaacagccccaagcttctcactcaggcc
atgaaggtgttactgcccttagctcgcacaggcagtaacgtggaggtgttgatgtcagga
ggcactcggtgttacgccgtcatcatcgcggccatggacgccttccctgtcgtggcggag
ctgcaggagacggcctgcctgctgttcaggaggttcacatcagagagtttctacgacatc
ctggtacggaacggcgtccagagagtcgccctgagagcctgtcagagttttcccaacaac
cctgtcctgcaagctgcagctctctcctgcctggctgaacttactgcaaccattgtgcag
agcaaagcggtggcggagaaaggacggaaggaagaggagaggggcacggaggaggtggag
gatgtgggcctggactggatggaagactgctgtacggcactggacctccatgcagccgag
ccggctgttcaggaagctgcgagctgggccattcacaatctgctactgcatggagcccaa
gttaacccttcagaagaggagcaggatggcaggactcctgttcacagacagttaatggct
gccatgctggttcactcctcctctcccagtgtgttcattgctgctaccagtgccatcgcc
acgctcattaccaacaacagtaaaatgagcttcttgctgctgtctggtggcctccatgtc
aatctggtagagatgatgaagagacatgcaagctcagcagaagtttccatcagcgcctgc
aagttgttaaagctgcttttccacagaaggactgccagcctggatgagctgaacatggcc
atgaatcagatcctcaccaccatgaagatgcacaacttccaatcagaggtccagctggca
gcactggaagccagtctgatcttcctttgcccagacaggagtttaagggagaatggttcc
tccattgcggatcctgacatggccgacgtgtcgctgagagtcctgaagaaccagtgtgtg
gtggaaggggctcacacactctacctggaagccctcaacaggtttatcagcagacctgcc
atacagcagtgcggcctgaaggtgctatcattcctggctgattgctcaggtgcagtggat
ctgttgtgccagcagggggcgatagacaccgtacttcatacactacatgcgttcccagag
gatcgaggtatatcttattggggtctaaccctgcttaactacctcgtgacgaagaagaag
ctctccaggatgatcgtaccagtcctggcctctgttgttgtcgcctccctaagtcagtac
aaagaagattctgagatggtgctgaagtgttttcaggtggccctgaggatgttggacgcc
tgctcaggggcagcagctgaactgcagagagaagacttcgacaggcagatcttccagcac
cttgtccaggagagggagcagagcgtcagcccactgcggaaagctgtgtgtctggctttg
tccaagatgtggagcgactcggagctacactacagcatgctagaaaaagcctgcatggac
ggcaacacgctgatggcagagtgcctcattgagctgggcgccgacatcaacaggaaggca
aaaacagagtctctcatctatcaggtgtgtgagaaaggaggtcctctggagctggtggag
ctcctggtgagcagaggcgctccagagcagcaactccgcagagctctagctgtgagcttg
aagagcgccgacgggcccatcgtcatcctgctgctcagccggctcggtctggacttcaac
aacagcgccctctgtctgggaggcttccgactcggcagattggacgccgcttggctgagc
cccctgctggccgaacggggcagggcatacagtctgcgctacagcagtaaaggtgtggat
ttggccaggtacattcagtccctgcagaggtccaagagcgtcggtggtttttccagaccc
atgtcagaccagtgtctgacttccggctacatttcagacgagagcgatgactccagcttc
agcgccgtgtcgatggatgacagcttgtttatgaatgacgaaatagagagtgatggaagt
gatccagtgtcggggactctgtctccaaagtccaaaaataactccgttgaggagctgagg
ggagactccttcaaaaggaagcagggacgtcacaggcactccagtgcagagagtcctcaa
cccgaaaatgaaaataatgaatcgactaatataagatgcgtacggagaaactctaagccg
gtgctgggctctggtgagaactccgctgctcttttcaaagaaagggagaggatccgcctg
ctggacctgtcagggaacgagttggactcgctgtcctgtttccttgacgatgctcttgtc
cagcagcagctgtggcacgtccatcgcctggacctgagcagcaacgttctgctggacttc
ccctctgccatctgccagagtttgaagagtctgacccgtctggacctgcagggtaaccag
cttcggtcgttgccagacgacctgctggctctgccctcactgagcacgctcaacgtctcc
cgtaactgcattggccccgtgctgaccttcgaccccgctgtcacctgcccctcactgagg
cagctcaatctgtcattcaataaaatcaccacattcccctatgagctgggccggaccatg
ggaaagctggaggagctgtttatggacggtaacggtttaactgagctgtgctcggctctc
tatctcccggaagtcaagctgctggatgtgagcaagaataatgtggagaatatttctcct
gactttctgaccacctgccctaaactggaaactttgaatgcttcaaacaacaaaatatgt
tccctttcccagctgccagccaaggtcacaacgttgaaattggctaacaacaagttcact
cacgttcccgaggccatactgaatctaccaaacttacgttcagtggacatgaggaccaac
accatcgacgttctacctggtccgggctgctgggtgtcccacaacatccgggagctgatg
ttcagtcagaacgacatcaaaggtttggatctgagtggaccgatcttcagatgggccaga
ctggagaagctccatctgagtgacaacaagcttaaagagatcccgccgcagatcggcata
ttggaaggcctgaactctctggatgtgagtcggaacgccagactgcggtcgttcccggat
gaaatgggaaagctgggcagactgtgggacctgcctctggacggccttcgactggacctg
gatctgaaacttattggcaacaagaccaaagacatagtcaggttcctgcagcaccgcctg
aagaaggccgtgccgtaccaccgcatgaagctcatcgtggtggggaccaccagctgcggg
aagagcagccttgtcaggcagctgatgaagatgaagcggtcccagctgaactcaaagcag
agcgctgtggacgttttcgactggaccgtcaagaaaatgttgctgaacgtctgggacttc
tcaggtggagaggagctcactggctctcaccctctcttcctcacatccagagcgctctat
ctggtcgtctacgacctcagtaagggacccagtcaggtggacgctcttaagccctggctc
ttcaacattaaagcagtggctccgctgtctccagtcatccttgttggaacccacaccgat
gtgagcgaggagctgcagatccagtcgtgcctgagtaaaatcagagaggagctgctgaac
catcagggcttcccggccatcagagactgtcacatggtctcgctctgcgaggatccggac
tccatcgccaaactccgcagggcggtcatcagagaggtcaccaacttcaagatccaaggc
cagcaggttatgggtcagctggtgccagactgctacgtggagctggagcgcagaattctc
caagagaggagcagagtcccgccagagtttcccatcctcaggtacgacaagcttctgcag
cttatccaggagagtcagctgcagctggaggaagccgaactcccccacgccatccatttc
ctcagcgaagtgggaattttattacactttggcgaccctgctctccaacttcaagaactt
tactttatcgacccacagtggttgtgtaacattctgtctcagaaactgaccttgaagagc
tgtggcctcttggagcaaccaaagggagtggtccagcgttctgttgtggaaaggtttctg
ttggagaccaaatgtttccccaagagccacatgctccagttcttcaaacttttggagaag
tttcagattgccctttcctttggtgaggaccagctactggtacccagcagtttgtccaaa
cacagaccagttatagaactacctcactgtgaaaactctgagatgattgtgcgtctgtat
gagatgccctacttccccatggacttctggtctaggcagatcagtcgcctgttagaggtc
tcctcatatttgctctgtggaagagaaaaggtgcttcgacccaaccttatttactggagg
cgaggtatttacctgaactggtcccatgacgcgtactgtctgatggaggctacttcagag
gagcagagtccctccagctttgtgaggataaccgttccctcatctcaaaaaggccgagtg
ttactgggccaagtggtggaccacgttgactccgtactggaggaatggttttctggcctg
ctcaacaccgacatgcatggcaatggagaagctttgctaaagaagtgggctctgtacagt
tttgaagatggccaggagtggagcaagattctgctagaagacctttgtaaccattttgat
gaagatttcttgatggtgaacccagagaatccgcgctgcaagcttctgatttctcagatc
gccccagacctggtgctgagtgaccagcctgcaggaatttcactggatggggaggaattg
gaagtagacctctccaaagaacacagactaggggacggaggttttggaacagtttatcga
ggaatttataaaaccgaagaagttgccgtgaaggttttcaacaagcatgcttctgatctt
tacgtccacagactcctcagacaggaactggtagtcctgggtcgtctccgacaccccagc
ctggtgagcctgctggctgccggctccgctcctccggtcctggtgatggagctcgctcac
agaggctctctggactccctctttaaccacgagaatggcagcctgaaccagaagctgcag
cacaggatcgccctgcatgtggctgatggcctcaggtacctccataccgccatgatcatc
tatcgggacctgaagccccacaacgtgctcctcttcaacctgaagagcgactcggagatc
atcgccaaaatcaccgactacgggatcgctcagtattgctgtagcatgggcgtgaggagc
tccgaggggactccaggtttccgagcgcccgaggtcgcccgggggaacgtgatctacaac
cagcaggcggacatgttctcgttcggcctgctgctgtacgacttactgacaagaggcgag
cgcatttcagaaggcatgaagttccccagcgagtttgatgaagtggcggtgcagggaaag
ctgccagacccagtaaaacactatggctgctcaccttggctcagcttccaggctctgatg
atggactgtctgaaggaaagcccacaggatcgacccacctctgctcaggtgtttgaccgg
ctgaattcaggggaaatgctgagcttaataagtgaagtgaagctttccggcatgtttact
gctcagtgcatcacaatgagcagcggcggcgctgccaccggcggcgaccagaagacatca
agccacacagcctggctcggtgggggcagcagctccaagaggaagggctacatcacagcc
gtggacctgcacaccaatgtggtcaccacacaggaggtcgataccagccccgtcctttgc
ctcgtaacggttcagatcccaaatgaggaatttgattggctggtggcaggcatgcagtct
ggctccttactggtcatcagcacccaggacgtgtccacttatcaccacctgcagagtgtc
acagatgccgtcacctcgctgtacttccatgtacatcctcggcgcacccaaaggacgaat
tacttgctggtcggcaccgcagatggagttctgagtgtttatgaggagtccgtgctcatg
cgggagaatggccagccagtgaaaagcgtcaccgtgggaaacggcagcactccgctcatg
tgtttgggccagtcgacccactcgctggacagcaggacggtctgggccggctgtgggacc
aagatcctctgcttctcagccgactacgacgtctgcaagttcatcgacacgaaaccaaac
ctcatcttccggcagcagcggggtcagagcagcgaggcgtgcgtctccctgatggtggtg
gacagacacgtgtatctcagcaaagccagcactccgaccgtggaggtgtgggacaagaag
agcgagaggatggtggactgcatcgactgcgcgcagatcatcaggcggggcggcggggtg
gagccgctctccgaggcgtcgccctcctgggccacggtgaagaccctgatgatgcagaac
accgcagcgctctggatcggcactagagggggctacctgctcctgctggagctctccaag
caccaggctctgcaggtggtggcaccatcgtgcggctccatccgtgccatcgtccctgca
gtcatacagtcgatgaactggaagaacgcggtgctggttttgggccggaggctcccacga
gacaggaaccgggacgatgaggagtcggtgctgatggcgtggagcagcacgctccctcag
gaggtcaaagacctgaagaagcactgtgagaagagggagcgcgccgcggccaggatgagg
gagcagctccaccacgcctgggcagcagaggagtcagtcaaagggatgaactcttcagct
gcactgaagaggatgttttacctcagcgcctga
DBGET
integrated database retrieval system
