Xiphophorus hellerii (green swordtail): 116708247
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Entry
116708247 CDS
T07363
Symbol
alkbh8
Name
(RefSeq) alkylated DNA repair protein alkB homolog 8
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116708247 (alkbh8)
Enzymes [BR:
xhe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
116708247 (alkbh8)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116708247 (alkbh8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy_2
Methyltransf_11
RRM_1
Methyltransf_25
2OG-FeII_Oxy
Methyltransf_12
Methyltransf_23
Methyltransf_31
RRM_3
MetW
RRM_occluded
ALKBH8_N
Methyltransf_9
Ubie_methyltran
PHM7_cyt
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
116708247
NCBI-ProteinID:
XP_032401992
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All DBs
Position
18:complement(19940781..19953242)
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AA seq
683 aa
AA seq
DB search
MDCTVVNNVKAAARRGKEVKKVLRKQLKASHTLLKHEGISTASQPTKNLVVANGGLGNGV
SREDLSAAMKQFGDVESLFMPPQKPYAFVTYRSEDDARKAHTQLNGQKLQSGENSVTLYL
SYVDSEKHKEEVLVHFPEELALVEDFVSPEEEILLLAAVDWSTSNQAQKALKHRRVKHYG
FEFRYDNNNVDKDKPLPAGLPEECLPVLHRCLQDGHINVLPDQLTVNQYETGQGIPPHID
THSAFEDTILSLSLGAKTVMEFRHPDGRVVPVVLPERSLLVMKGESRYLWTHGITPRKFD
LVPACETQSADHSEPNLVSHGGLTLSKRGTRTSFTFRKIRHEPCCCAFPSACDSQGGSSP
CPPSQPSLPSCHADATRLEEEYVHRVYDAIASHFSSTRHTPWPRVCHFLSALQPGSVLAD
VGCGNGKYLGVNPQLITVGCDRSSSLVQICAERGFNAFVSDALSVPLRMDSCDACISIAV
IHHFSTQERRLAAVRELVRLLKPGGQALIYVWAYEQEYNKQKSKYLKDHNKPQNGEKSKD
KPEEGQEPHEEPSVLTTSHLDNNYTGGLKDDSKMTEGKLSVHTNRTAFNSQDLLVPWHLK
GRKTRGEEEFSSGLNTTNCPDSKLSPSVDTSQVPGGSSVPVFHRYYHVFQQGELEQLCIE
VTGVKVQTSYHDQGNWCVILQKE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggactgtacagtggtaaacaacgtgaaagccgccgccagaagaggcaaagaagtcaag
aaagtgctgagaaaacagctgaaggccagtcacactttactgaagcatgaaggcatcagt
acagcatcgcagcctaccaagaatttggtggtggctaacggaggcttgggaaacggtgtc
agccgtgaggacctctctgccgcaatgaagcagtttggagacgtggaaagtctgtttatg
cctcctcagaagccctatgcttttgtcacatacagatcagaagatgatgctcggaaagct
cacacccaacttaatgggcagaagctccagtctggggagaacagcgttactctttatctc
agttatgttgattcagaaaagcataaagaggaagtgttggtccattttcctgaagaatta
gccctagtggaggattttgtgtctccagaggaagagattctgctcctcgctgctgtggac
tggtcaacttctaaccaagctcagaaagctttgaaacacaggagagtgaaacattatggc
tttgaatttcgctacgacaacaacaatgtggacaaggacaaaccattacctgcaggtctt
cctgaggagtgtctgcctgttttgcatcgatgtctgcaggatggacacattaacgtcctg
cctgaccagctgactgttaaccagtatgagactggacagggtatcccccctcacattgac
acccactctgcctttgaggacaccatcctatctctgagtctcggggcaaagacggtgatg
gagtttcgtcacccagacggccgagttgttcctgttgtgttgcctgaacgcagcctgctg
gtgatgaagggggagagcagatacctctggacacacgggattaccccacggaagtttgac
ctggtgccagcttgtgagacacagtcggctgatcattctgagcccaacctcgtttcccac
ggcggtctcactttgagcaagaggggcacccgcacttccttcactttccgcaaaatcaga
cacgaaccttgctgctgtgccttcccctctgcctgtgacagtcagggaggatcctcccca
tgcccgccatctcagccctctcttcctagttgccacgctgacgcaacccgtttggaggag
gagtacgtgcaccgggtgtatgacgccatcgcctctcacttcagcagcactcgccacact
ccatggccccgcgtttgccacttcctgtccgcgctccagcctggaagcgtgctggccgat
gtgggctgtggaaacgggaagtacctgggggttaacccgcagctgatcacggtgggatgt
gaccgcagcagctctctggtccaaatctgtgcagagagaggattcaacgcgtttgtatct
gatgctcttagcgtccccctgcgaatggactcatgtgacgcctgcatctctatagctgtt
atacaccatttttccacacaggagcgtcggctggcagctgtgagggagctggtcaggctt
ctaaaacctggaggtcaggcgctcatctatgtttgggcttatgaacaagagtacaacaag
cagaaatctaaataccttaaagaccacaacaaaccgcagaatggagagaaaagtaaagac
aaaccagaggagggccaggaaccgcatgaagagccaagtgtcctcaccaccagccatttg
gacaacaactatactggaggcttaaaagatgacagcaaaatgacggaaggcaagcttagt
gttcacactaaccgcacagcctttaattcccaggaccttttggttccctggcaccttaaa
gggaggaaaacacgaggggaagaagagttcagttctggtttgaacaccacaaactgtcca
gactctaaactcagtccaagtgttgacacttctcaggttcctggtgggagttcagtccct
gtttttcatcgctattaccatgtcttccagcagggggagctggagcagctctgcattgag
gtgaccggagtcaaagtgcaaaccagctatcatgaccaaggaaactggtgtgttatatta
cagaaggaataa
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