Xiphophorus hellerii (green swordtail): 116708293
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Entry
116708293 CDS
T07363
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59 isoform X1
KO
K12028
tripartite motif-containing protein 59
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116708293 (trim59)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116708293 (trim59)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
BAR_3_WASP_bdg
TRAF3_RING
MgrB
ZapG-like
zf_RING_Vps8_fungal
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
116708293
NCBI-ProteinID:
XP_032402067
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Position
18:25385279..25392476
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AA seq
474 aa
AA seq
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MKAAREGSGKETLLWTLSTENRIYPPLDSCQLFSRCDPTASRPPPAMDSLEEDLTCSVCY
SLFSDPRVLPCSHTFCKNCLENLLQVSTNYSIWRPLRLPIKCPHCRSVVELPQSGVDALP
SNVSLRAIVEKYQRDSEPRAPSCQEHRRQPLNMYCVQDRQLICGLCLTVGQHQGHPIDDL
QAAFVREKQTPALLLARLSEQKWSQVCELGEQLEQEKARCDALLRQDRQEVNQFFVSLEE
VLARKKQAYLEALSEAAAEVAATYDPLIHTVKELQEEQLDLVSLGSSVEEEDSPLVFLEK
VHQFRDRVEKFIRTPLPSGINLSVTPRAAAYLQQNWPAVTISSLEQAPVPKLFCCTRCDG
GVGTEADPPVPPAWDRWHQLKPIASVALLGLLLLLAALWANPVGGASLGFSLLSRLSQLA
QSLSGSLVSSVWDTMEAECAEMGAAVQRWSSQLSVFRDRVVQQVAALFKTSTSR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagcacgagaaggaagcggaaaggagacgctgttatggacactttccactgaa
aataggatttatccaccgctggactcctgccagctgttcagcaggtgcgaccccacggcg
tcccgtccgcctccagcgatggacagcctggaggaggacctgacctgctccgtgtgctac
tcgctgttctccgacccgcgcgtcctgccgtgttcccacaccttctgcaagaactgcttg
gagaacctgctgcaggtgtccaccaactactccatctggcgcccgctgcgcctgcccata
aaatgtccccactgccgcagcgtggtggagctgccgcagagcggcgtggacgcgctcccg
tccaacgtgtctctgcgagccatcgtcgagaaataccagagggacagcgagccgcgggcg
ccgtcctgccaggagcaccgcaggcagccgctcaacatgtactgcgtccaggaccggcag
ctgatctgcggcctgtgcctgaccgtcggccagcaccagggccatcccatagacgacctg
caggcggcctttgtcagagaaaaacaaaccccggcgctgctgctggccaggctctcggag
cagaagtggagtcaggtgtgtgagctgggggagcagctggagcaggagaaggcgcgctgc
gacgctctgctgaggcaggaccggcaggaggtcaaccagtttttcgtctctttagaggag
gtgctggccaggaagaagcaggcctacctggaggctctgagcgaggctgctgcagaggtg
gccgcgacctacgaccccctcatccacacagtcaaggagctgcaggaggagcagttggac
ctggtgtctctgggctcgtctgtggaggaggaagactcccccctggtgtttttggagaaa
gtccatcagttcagagatcgggtggagaagttcatcagaaccccgctgccctccgggatc
aacctgtcggtgacgccgcgcgcagcggcctacctgcagcagaactggcccgcggtgacc
atcagcagcctggagcaggctccggttcccaagctgttctgctgcaccagatgcgacggt
ggcgtcggcacagaggcagacccgcctgtcccacctgcctgggacaggtggcaccagctg
aagcccatcgcttcggtagctctgctgggcctgctgctgctgctggcggcgttgtgggcc
aaccccgtcggaggcgcgtcgctcgggttctccctcctttcccgcctcagtcagctggcc
cagagtctgagcggcagcctcgtctcgtccgtgtgggacacaatggaggcggagtgcgca
gagatgggggctgcagtgcagaggtggagctcgcagctgtctgtcttcagagaccgagtc
gttcagcaggtggctgctttatttaaaacgtcgacgtctcgctga
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