Xiphophorus hellerii (green swordtail): 116708323
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Entry
116708323 CDS
T07363
Symbol
hnf1b
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116708323 (hnf1b)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116708323 (hnf1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
APP1_cat
Homeobox_KN
HTH_5
Motif
Other DBs
NCBI-GeneID:
116708323
NCBI-ProteinID:
XP_032402111
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Position
18:29659044..29685673
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AA seq
565 aa
AA seq
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MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPPPQGFGVKMESLPVSPGKL
NGADADSKPVFHTLTNGHGKGKLSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRAEVD
RMLAEDPWRAARMIKGYMQQHNIPQREVVDITGLNQSHLSQHLNKGTPMKTQKRAALYTW
YVRKQREILRQFNQATQASIGSMSDKGSQDPAFFYPEFNMSGPGMGQSSEEVGTEPLSKK
MRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLGSNL
VTEVRVYNWFANRRKEEAFRQKLAMDAITAPPHGINPLLSHSSPHHPQTSVSPPMRYSQG
PGEVSSSTAISHHSSSSQSVLQQVSPGGLDHSHSLLSPDAKMISGSGGGLPPVSTLTNIH
SSHHSHQQPQNLLMPLTGVMAIAQSLSTSQAQTVPVINSVAGSLAALQPVQFSQQLHSPH
QPSLMQQSPSHMSQQPFMATVTHSHMYSHKQEPPQYSHPSRFPSSMVTDANSISTLSSMS
SSKTDAPVNKMVQLGGISWCPLPAW
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaaaatggtctcgaagctgacgtccctacagcaggagctcctcagcgccctg
ctggactcaggcgtcaccaaagacgtcctgatccaggccctggacgacatggaccccagt
ccgccgccgcagggcttcggggtgaaaatggagagcctgcccgtgtcccccggcaagttg
aacggcgccgacgcggactccaagcccgtcttccacacgctcaccaacggacacggcaag
ggcaagctgtccggggacgagggctccgaggacggggacgactacgacaccccgccgatc
ctcaaggagctccagtcgctcaacacggaggaggccgcggagcagcgggcagaggtggac
cgcatgttggccgaggacccatggcgggcggctcgtatgatcaaaggttacatgcagcag
cacaacatcccccagcgggaggtggtggacatcacggggctcaaccagtctcacctctcc
cagcacctcaacaaagggacgcccatgaagacgcagaagcgagcggccctctacacctgg
tacgtcaggaagcagcgggaaattcttcgacagttcaaccaggccactcaagcttctatc
ggcagcatgtcagacaaaggcagccaggatccggcctttttctacccggagttcaacatg
tccggtccgggtatgggtcagtcgagcgaagaggttggcactgagcccctgagtaagaaa
atgaggcgtaaccgtttcaaatgggggcctgcatctcagcaaatcctgtaccaggcctac
gagcggcagaagaaccccagcaaggaggagagggaggctctggtggaggagtgcaacaga
gccgagtgtcttcagagaggcgtctccccttccaaagctcagggactcggctctaacctg
gtcaccgaagtgagagtttataactggtttgccaacagacgtaaggaggaggccttcagg
caaaagctggctatggacgccatcactgcaccgccgcacggtatcaacccactgctgtcg
cacagctcgccgcatcatccccagaccagcgtgtcccctccaatgcgttacagccaaggc
cccggcgaagtctcctcctccaccgccatcagtcaccacagcagcagcagccagtcggtg
ctgcagcaggtgtccccgggaggactggaccacagccacagcctgctgtcgcccgacgcc
aagatgatttcaggctcgggcggaggacttcctccggtcagcacgctgaccaacatccac
agttcccaccacagccaccagcagccgcagaacctgctaatgcctctgacaggagtcatg
gcgatagcgcagagtttgagcacgtcgcaggcccagacggtgccggtgatcaacagcgtg
gcggggagcctcgccgctctccagccggtgcagttctcccagcagctccacagcccccac
cagccgagcctgatgcagcagtcgcccagccacatgagccagcagcccttcatggccacc
gtcacacactctcacatgtattcgcacaaacaagagcccccgcagtactctcacccgtcc
cgtttcccctcatccatggtcacagacgccaacagcatcagcaccctcagctccatgtcc
tccagcaagacggacgctcctgtaaacaagatggtgcaactcgggggtatctcctggtgt
cctcttccagcttggtga
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