Xiphophorus hellerii (green swordtail): 116708331
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Entry
116708331 CDS
T07363
Name
(RefSeq) transcription factor RelB-like isoform X1
KO
K09253
transcription factor RelB
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116708331
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116708331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116708331
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
116708331
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
116708331
NCBI-ProteinID:
XP_032402118
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Position
18:complement(24496185..24510685)
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AA seq
577 aa
AA seq
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MKDMDFFKAEEPTPSSGINAFSHICTPNGELDLISEIINGCNEQQNGSLPAPLPLPPPPD
RCWRTTEGEDVLNQDGFTLLQNLQPASKPVLVPRGTAPNPAPLREMASAHPSHKPVGPTG
RGRGPSCSLTPKGGVPSQSLQSNGNMLERILEKPKLVVVEEPKDRGMRFRYECEGRSAGS
ILGASSTDNNKTQPTIEIQGPIDHIKKVTVTVSLVTKDYPHRPHPHCLVGKDCVAGSGIC
VVCFNPHTARRHSFANLGIQCVRRRELDVSLQKRRNQNIDPFKTGNTKGIEDMDMNAVRL
CFECLLEWDDGRKDSLCPVISKPIYDKKATTTSELKICQLNLSKGSCRGKTEVYMLCDKV
QKDDIEILFRHGSWKANGEFAQTDVHRQIAIVFKTPPYQDQDITEEVEVNVLLRRVSDQM
ESEPVSFMYLPHNPDPYEVKRKRATIKRDISVTEPAPSSKQTFNFPMETQNVMSSDDSHL
AFLPSPETGMMDHGALDEQTMLDFLQFLTEQNLPGDIAADGNAFPCLNVNLNANYNHFPP
DFSQFNDIQFNMLVTDSQMAQSEQQDSVMQVKTEEEL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatatggacttcttcaaagccgaggagccaacacccagttcggggatcaacgcg
ttttcgcacatttgtactcccaatggcgaactcgatctaatttcagaaatcatcaatggc
tgcaacgaacagcagaacggctcccttcctgccccacttcctcttcctcctcctccagac
cgctgctggaggacgacggagggtgaagacgtcctaaaccaggacggcttcaccctcctg
cagaacctccaaccggcgtccaaacccgtgctggtacccagaggcactgcacctaatccc
gctccactgcgagagatggcatccgctcatccttcccacaaacccgtgggccccacagga
agaggtcgaggcccgtcctgctcgctgacccccaaaggcggcgttccctcccaaagcctg
cagagcaacggcaacatgctggagcggatcctggagaagcccaagctggtggtggtggag
gagcccaaggaccggggaatgaggttccgctacgaatgcgagggtcgctcggccggtagc
atcctgggggcgtccagcaccgataacaacaagacgcagcccaccatagagattcagggt
cctattgaccacataaagaaggtgacagtgaccgtttctttggtcaccaaagactatccc
caccgacctcacccgcactgccttgtgggtaaagactgtgtagctggctcaggaatctgt
gtggtctgctttaaccctcataccgcccgacgtcacagctttgctaatctcggcatccag
tgtgtgagaaggagagagctggacgtgtcgctgcagaaaaggagaaaccaaaatatcgac
ccttttaaaactggtaacactaaagggatcgaggacatggacatgaacgcggtgcgtttg
tgtttcgagtgcctgctcgagtgggacgacggcaggaaggactcgctctgcccggtcatc
tccaagccgatctacgacaagaaggccacgaccacgtcggagctgaagatctgccagctg
aacctgagcaaagggtcctgcagaggcaagacggaggtctacatgctgtgtgacaaagtg
cagaaagacgacatagagatcctcttcaggcatggctcgtggaaggcgaacggcgagttc
gctcagacagacgtccaccggcagatagccatcgtgtttaagacgccgccctaccaggac
caagacatcacggaggaggtcgaggtcaacgtcttgctgcgccgcgtctcggaccagatg
gagagcgaacccgtctccttcatgtacttgccgcacaatcccgatccgtacgaagtgaag
cgaaagagagccacgattaaacgggacattagtgtgacagagccagcaccatcttcaaag
cagaccttcaacttccccatggagacacaaaacgtgatgtcatcggatgacagccacctc
gcctttctgccttctcctgaaacgggcatgatggaccacggcgccctggacgaacagacc
atgctcgacttccttcagtttttgaccgaacagaacttgccaggcgacatcgccgcagac
ggcaacgctttcccctgtctgaatgtgaatttaaacgcaaactacaaccactttccgccg
gacttttcccagtttaacgacatccagtttaatatgcttgtcactgacagccagatggcg
cagtcagaacagcaggacagtgtcatgcaggtgaaaacagaggaagagctatga
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