Xiphophorus hellerii (green swordtail): 116708361
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Entry
116708361 CDS
T07363
Symbol
ptprz1
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116708361 (ptprz1)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xhe00535
]
116708361 (ptprz1)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116708361 (ptprz1)
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116708361 (ptprz1)
Proteoglycans [BR:
xhe00535
]
Cell surface proteoglycans
Others
116708361 (ptprz1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
Tc-R-P
PTP-SAK
Pur_ac_phosph_N
DSPc
GUN4_N
PTPlike_phytase
Y_phosphatase3
PTP-NADK
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
116708361
NCBI-ProteinID:
XP_032402135
LinkDB
All DBs
Position
2:complement(30085680..30175680)
Genome browser
AA seq
1880 aa
AA seq
DB search
MDSKGSGLLLVAHFILICQQAGGYTYRNQRKLAEDIDWSYAGGLNQKHWAKKFPLCSSAK
QSPININEDLAPVKLQYQKLRFDGWESMTTDSTTIKNDGKTVAVNVDGDFYISGGGLRSK
FKVGRITFHWGRCNASSEGSEHSLDGVKYPLEMQIYCYEAHQFDSLDEAIQSSGRITALA
VLFETSTEDNMNYAPIISGINSVSRYGKSAAVSPFTLQGLLPNSTEKYFIYNGSLTTPTC
DETVEWIVFKNKVAISDEQLEMFCEVMTMQQAGYVMLMDYLQNNYRDQQEQFMGQVFSSY
TGIEEVQTPVCSSEPESIQAAPQNLSSLLVTWERPRAVYETNIEKYSITYQLAKAEHSVL
SEYLTDGYQDTGAILDDLLPNSTYEVRVVAICTNGLRGRVSDLLTVVMPFDDLENALDPG
SDETEFEGNFEPDLSWNEVDQIRNKNLNRGTADSPRTTTSAPPWFHLSGIGTSTEESSER
RTTTEPASALISSQSEEVLRPSEETGPISTPLQPPEDTKLPESRGSAGTGSNTLFYFTTE
EPTISTSPSPLLTYTKTDGVNVQVHHEDLSENGKVGPSTVNVMAPDTKTDSSKVIFQYPP
TIESSLTTDMSSKSPPSFKQAETGLAQAISEDSTTNENVSTHTRGFPEVQVSPSTSKTFS
STEGVHHSATSSTVPHFSSTSVMLSGIVVQSTQPLSNGERSFFFPSSSSASSPMCDTLDP
SATLSIRLHDPSSLWPVLSASAPDSQHAATGFLSSEDLTSTSIPFLLASNLPHLSLPSHS
LPGPTTDSVFSNLTFWDSDNDVLLSGSSGDLSVLSNTPPLESELDLTHASITAEFSQSSL
NFSSSTLSLSSSPTLQPSVLFSSDFTFSLGLSKSPATGFEDSRYATGSTTESLVPEIIGD
GLLLASDVDIVCGCSLETSASSSWLHTSPHVSLSASAKSATSLELYSSMVLLSASGGDVE
NLPLSLKSLGSAALSFDHSLLSHSTISMSSPQFLQATHSDLHLSVTATLSVGVDPSLSAS
ERSTTFQTSSLPFPPTTSPLTPTTEEQVLDFSSSSSGSAFFPDSQEGSDQEWDKSQTSAS
GVSPLPHSTKVVSTVPPFILLESGQSPDDADEHSSAFYFESGSGSAISPEVGGKVAPTDS
EVTSGSPWSLGGTEVSGSGQGEGLNDNETSSDFTISERAETESEEEDPVSDASNSSHESR
VGSTSEKERKAVVPLVIISTLTLLGLVVLIGIFIYWRMCFQTAHFYIHNMSSPRVITQSA
VASTSGEDTAFLVKDFVKRVAELHSTQGFTAEFETLKESYEDVQACTVDMWMTSDSSNYP
DNKTKNRYNNILAYDHSRVQLSPRASKDGKPTDYINANYVDGYKRPRSYIAAQGPLRSSI
EDFWRMIWEQNVHIIVMITNLVENGRRKCDQYWPAEEQEEYGPYLVTVKSTRVLAYYTHR
TFRVRDTITKKSSKKGWSNERTVEQFQFTQWPDMGVPELSLPLLSFIRKSSRANTDNMGP
VVVHCSAGVGRTGTYIVLDSMLKQISHEGTIDIPGFLKHIRTQRNFLVQTEEQYIFIHDA
LVEAILCGDTEVLAAHLHNYVGELLTPGPSGRTRLDKQFKLVCHNEVKQSDFSSALQDNN
SSKNRDCSVIPADRSRVCLSITAGETTDYINASFITGYRLNREFIITQNPLPGTIKDFWR
MIWDHNIQVIISLPGTTEEAELCALCPSNEPSISFNMFTVTQKSEAHICLSNEDMLVVRE
YALSAAKDDFVLEVKHFLAPCWPNPDSPISNTFELISLVNEERASRDYPTVVHDDVGGVT
AGTFCALSSLKQQLEAEGSADVFQAARLANLLRPGVFSDVEHYQFLYKAMLSIIGIQEAE
KTLLFSDNNGTTTDSLESLV
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggacagtaaaggcagcgggctgcttctggttgcgcactttatcctcatctgccaacaa
gctggaggttatacatacagaaatcaacgcaagttagcagaggacattgactggtcgtat
gcaggaggattaaaccaaaaacactgggccaagaagtttcctttatgcagcagtgcaaag
cagtctcccatcaacatcaacgaggacctggctccagtcaagctgcagtaccagaagctg
aggtttgatggttgggagagtatgacgactgacagcacaaccatcaagaatgatggcaag
acagtggcagtcaatgtggatggagacttctacattagtggaggaggtctcaggtcaaag
ttcaaagttgggcgcataaccttccactggggacgctgcaatgcctcctcagagggttcg
gagcatagtctggacggagtcaaatatcctttagagatgcagatctactgctatgaggct
catcaatttgactctttagatgaagcgatccagtccagtggcaggatcacagcactagct
gtcttgtttgagacaagcactgaagacaatatgaactacgctcccatcatcagtggtatc
aacagtgtgagcagatatggaaagagtgcagcggtgtcaccgtttaccctgcagggtctc
ctgccaaactccacagagaaatatttcatctacaatggatccttgaccacaccgacctgc
gacgagactgtcgagtggatcgtctttaagaacaaggtggccatatctgatgagcagctg
gagatgttctgtgaggtgatgacgatgcagcaggctggatacgttatgctgatggactac
ctgcagaacaactacagagatcagcaggagcagttcatgggccaggtgttctcctcctac
acaggcatcgaggaagtgcaaacaccagtgtgcagttcagagcctgagagcatccaggca
gctccccagaacctcagcagcctgctggtgacatgggagcggccaagggcagtgtatgag
accaacattgagaagtactccatcacctaccaactggccaaggcagagcactctgtcctg
tctgaatacctgaccgatggatatcaggatactggggcaatactcgatgacttattgccc
aattctacctacgaggtacgagtggtggccatctgcaccaatggtctgcgtggacgcgtg
agtgacttgctgacagttgtcatgcccttcgatgaccttgaaaatgctttggatccaggt
tcagatgaaactgaatttgagggcaactttgaacctgacttgtcctggaatgaggtggac
caaatcaggaacaagaacttaaatcggggtactgcagactcgccaaggaccacaacatct
gcaccgccttggtttcacttgtctggcattggaacttctacagaagagtccagtgagaga
agaaccactactgaacctgcttctgctctaatatccagccagtctgaggaagttttaaga
ccctctgaggagacgggacccatcagtactcccttacaaccaccagaggacactaagttg
ccagaaagcagagggagtgcaggcactggcagcaacacccttttttatttcacaacagaa
gaaccgacaatttcaacttccccctctcctcttctcacttatacgaagacagatggtgta
aatgtacaagtacatcatgaagacttatccgaaaacggaaaagttggcccaagcactgtt
aatgttatggcccctgacacaaagacagacagttcaaaagttatttttcaatatccacct
accatagagtcatctctcaccacagatatgagcagtaaatcacctccgtcctttaagcaa
gccgagactggtttggcacaagccataagtgaagacagtaccactaatgagaatgtttct
actcataccagaggttttcctgaggttcaggtatcaccctctacttccaagaccttttca
tccacagaaggtgtacaccatagcgccacaagttccaccgtgcctcatttttcatccaca
tctgtgatgctgagtggcattgttgttcagtccactcagccactgtcaaacggtgagcgc
agctttttcttcccctcctcttcctctgcctcctcccctatgtgtgacaccttggaccca
agcgccactctctccattcgcttgcatgacccttcctccctgtggcctgtgttgtctgcc
agcgctccagactcccagcatgctgctactggatttctgtctagtgaagacctgacttcc
acctcaatccctttcctccttgcttccaacctgcctcacctctctctcccctcacactcc
ctacctggtccaacaactgactctgtgttctctaacctcactttttgggatagtgataat
gatgttttgttgtctgggtcttcaggtgatctctctgtacttagtaatacccctccactc
gaatcagagctggacctaacacacgccagtatcacagccgaattttcccaatcttccttg
aatttttcatcctcaacattatctctttcttccagccctaccctgcagccttcagtcctt
ttttctagtgatttcactttttctctgggattgtccaaatctccagcaactggatttgag
gattcaagatatgcaacagggagcaccacagagtctttagttcctgagatcattggtgat
gggttactcctagcaagtgatgtagacattgtgtgtggctgttctctggagacatcagca
tcttcatcatggttgcatacctctcctcatgtatcactgtcagcatcagccaagagcgct
acaagtttagaactatactccagcatggttttactttcagcttctggtggtgatgtagaa
aaccttccactatctctgaaaagtttgggctctgctgctttgtcttttgaccactctctg
ctatcccatagtactatctcaatgtcctctccacaatttctccaagccacccatagtgac
ctgcatctttctgttacagccacattgtctgttggtgtggatcccagtttgtcagcatca
gagagaagcaccacctttcagacctcttccctccctttcccgcccaccacttccccactt
actcccactacagaggagcaggtgttagactttagcagcagctcctctggctcagccttc
ttccctgactcacaggaaggatcagaccaggagtgggataaaagccaaacctcggcttct
ggagtaagcccacttcctcattcaaccaaagtcgtgagcactgtccctccattcattttg
ctggaatctggtcagagcccagatgatgcggacgaacactcttcagctttctattttgaa
agtggcagcggcagtgccatcagtccagaagtaggaggcaaagtggcaccgactgattca
gaggtgacctcgggttcaccctggtctctgggagggacagaggttagcggctcagggcaa
ggcgaaggccttaatgacaacgagacatcttctgacttcactatttcagaacgcgcagag
acagagtctgaggaagaagacccagtctcagatgccagtaacagcagccatgagtccagg
gttggctccacgagtgagaaggagaggaaggctgtggttcctctggtcatcatttccacc
ctcactctccttggcctggttgttctcattggcatcttcatctactggagaatgtgcttc
cagacggctcacttttacatccacaacatgtcatcaccccgagtcatcacacagtctgct
gttgcatcaacatctggtgaggacacggcttttctagtgaaggactttgtcaaacgcgtt
gctgaacttcacagcactcagggcttcaccgcagagtttgagacactgaaagagagttat
gaggatgtacaggcttgcacagtggacatgtggatgacctcagacagctccaactatcct
gacaataagaccaagaacagatacaacaacatcttggcctatgaccacagccgggttcag
ctttctccacgagccagcaaagatggaaaacccaccgattatattaatgccaactatgtg
gatgggtataagaggccgcggtcatacattgctgctcagggtcctctgaggtccagtatt
gaagacttctggaggatgatctgggagcagaatgttcacatcattgttatgatcaccaac
ctggtagaaaacggacggagaaaatgtgatcagtactggccggcagaagagcaggaggaa
tacgggccgtaccttgtgactgtaaagagtaccagagttctggcttactacacacacaga
acattccgtgtgagggataccatcactaaaaagagctcaaagaaggggtggagcaacgag
cgaacagtggaacagttccagttcacccagtggcctgatatgggtgtcccagagttgtct
ctgccgcttctcagcttcattcgcaagtcatccagagccaacacagacaacatgggccca
gtggtggtgcactgcagtgctggggttggccggacaggcacgtacattgtcctggacagc
atgctgaaacagatatcacacgaaggaaccattgacattcctggcttcttgaagcacatc
cggacacaaagaaacttcctggttcagactgaggaacagtatatttttatccatgatgct
ttggtggaggccatcttatgtggggacactgaagtactggcagcccaccttcacaattat
gtgggtgagctgctgactccaggaccatctgggaggactcgcctggacaaacagtttaag
ctggtgtgtcacaatgaagtgaagcagagtgatttctccagcgctctgcaggacaacaac
tccagcaagaacagggactgctctgtgatacctgctgacagatcacgagtgtgtctatct
ataacagctggagagacgaccgactacatcaatgcctcattcatcactggctacagacta
aacagagagttcatcattacccagaatcccttgcctggcaccataaaggacttttggaga
atgatatgggatcacaatatccaggtcatcatctcactgcctgggactacagaggaggcg
gagctctgtgccctgtgtcctagcaatgagccatccatcagcttcaacatgttcactgtg
acccaaaagagtgaggcccacatctgtctgtccaatgaggacatgctggtggtccgggaa
tacgccctgtctgctgcaaaggatgactttgttcttgaggtgaagcatttcctcgccccc
tgctggccgaaccctgacagccccatcagtaacacctttgagctcatcagcctggtgaat
gaagagagggcgagcagggactatcccaccgtggtccatgatgatgtgggcggagtcacg
gcaggaacattctgtgctctgtcgtccctaaagcagcagctggaggctgaaggttcggct
gatgtgttccaagcagccaggctggcaaacctcttgagaccaggagtcttcagtgatgtc
gagcactaccagttcctgtacaaagccatgctgagcatcatcgggatacaggaagcagag
aaaaccctcctattctctgacaacaatggaaccaccactgacagccttgaatctcttgtg
taa
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