Xiphophorus hellerii (green swordtail): 116708427
Help
Entry
116708427 CDS
T07363
Name
(RefSeq) RNA-binding protein 25-like
KO
K12822
RNA-binding protein 25
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116708427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116708427
Spliceosome [BR:
xhe03041
]
Complex A
U1 snRNP components
U1 related factors
116708427
Complex B
116708427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
116708427
NCBI-ProteinID:
XP_032402170
LinkDB
All DBs
Position
19:complement(23393128..23412206)
Genome browser
AA seq
853 aa
AA seq
DB search
MSYSPPINRPPIGIPQLPPGMPPPQYAGFAPPVPPGTPMIPVHMGVMAPAPTVLVPTTVT
IAQKPVTTKKDPVLIRAKDAEEGVGPTTTVFVGNISEKASDMLVRQLLAKCGIVLSWKRV
QGASGKLQAFGFCEYKEPESTLRALRLLHELLLGDKKLLVKVDAKTKAQLDEWKAKKRSA
NGGTTEGSKNNAQDEEEVLDEEIVRRDQVVKGAIDVLIREYSSELNAPSQDSDGQPRNRK
RKEKKEEDINAMELEDDKRDLISREISKFRDTHKKLEEEKGKKDKERLELEKERKERDKE
RERERERRDREKEKERERERERDKERERERERERDRERERTKERERSRDVSEARSRSRER
NREDKKRDRDEDEEDVYERRRLERRLRDKEAAYQERLKNWEIRERKKAREYNKENEREDE
RRREMMKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEMDERDRKREKEELE
EIRQRLLAEGHPDPDAELQRMEEEAERRRRPPLNLEAEEEVSQEKTHRDRELEQVRERER
HHERDRHHERDRHHEREREREKRASERPVEPKSQPPRQDSDEDDDNNDTNVNERHEDDFR
DGEDSLEAKPQLKPVMRPITIAPSVSSASGNATPNTPGNDSPCGIIIPGENTPDLQPLEE
HRPKIGLSLKLGATNSPSQLNAVKRKKLAAVDSVFNKFDDEEADEQPRKRKLVPLDYGDD
DKSLGLDGAEISAAKGGSINTEEKRKHIKSLIEKIPTARPELFSYPLDWAMVDSALMDRR
IRPWINKKIIEYIGEEEPTLVDFVCTKIMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLL
IYETEAKKIGLVK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtcttactctcctccaatcaaccgccctccgattggcatcccacagctgccccctggc
atgccccctcctcagtatgcgggctttgctcctccggttcctccagggactcccatgatc
ccagtacacatgggtgtaatggctcctgcacccacagtgctggtcccgaccacagttacc
attgcacagaagccggtaaccacgaagaaggaccctgtcctcatcagagccaaggacgca
gaagagggcgtgggccccaccaccaccgtgtttgtggggaacatctctgagaaagcgtct
gacatgttggtcaggcagcttctagcaaaatgcggtatcgttctgagctggaagagggtc
caaggtgcttctgggaaacttcaagcgtttggattctgtgaatataaggagcctgaatcg
acgctccgagctctcaggcttctgcatgagctcctcttaggcgacaagaagctgctggtc
aaggtggacgctaaaaccaaggctcagctggacgaatggaaggcaaagaagaggagcgcc
aacgggggaaccacagaggggtcaaaaaacaacgcgcaggatgaggaggaggttctcgat
gaagaaattgtgcgtcgggaccaggttgtgaagggggcgatcgacgtcctcatccgagag
tactcgagcgagctcaacgctccctcgcaagactccgacggtcagcctcgcaacagaaag
cgcaaagagaagaaggaggaggacatcaacgccatggagttggaggatgacaagagagac
ctcatatccagagagatcagcaaattcagagacacacacaagaaactggaagaggaaaaa
gggaagaaagacaaggaacgacttgagctcgagaaggagcggaaggagagggacaaggag
cgcgagcgcgagagggagcggcgcgaccgagagaaggaaaaggagagggagagagaacgg
gaacgggacaaggagcgggaacgagaacgggagcgggagagggaccgagaacgggagcgg
acgaaagagcgcgagagaagtcgagacgtcagcgaagcgcgcagcaggtcgagggagaga
aacagagaagataaaaaacgagatcgtgacgaagacgaggaagatgtttacgagcggcgg
agacttgagaggaggctgagagacaaagaggctgcttaccaagaacggctcaaaaactgg
gagatccgagagaggaagaaggctcgcgaatacaacaaagaaaatgagagggaggacgag
aggcggcgtgaaatgatgaaagaagccaaaagactgaaagagttcctcgaggattatgac
gacgacagggacgatccgaagtactacagaggcagcgctttgcaaaagcgactgcgtgac
cgcgaaaaggaaatggaaatggacgagcgagatcgaaagagggaaaaggaggagctggaa
gagattagacaaaggctgcttgctgagggtcaccctgacccagatgcagagctgcagagg
atggaggaggaagccgagcgcaggcggcggcctcctctgaacctggaagccgaggaggaa
gtaagccaggagaaaactcaccgcgaccgtgaactggagcaggttcgcgaacgcgaacgc
caccacgaacgcgaccgccatcacgaacgcgaccgccaccacgaacgggagcgagagagg
gagaagagagcctctgagaggcccgtggagccaaagtcccaaccgccccggcaggattca
gacgaggatgacgacaacaacgacactaacgtcaacgaaagacacgaggacgacttccgt
gacggcgaagactcactagaggccaagccccaacttaagcccgtaatgagaccaatcacc
attgccccatcagtttcttctgctagtgggaacgcgactccgaacactcctgggaacgat
tccccctgcggcataatcattccaggagagaacacccccgacctccagcctttagaggaa
catcggcccaagatcggcctcagcctcaaactgggtgcgaccaacagccccagtcagctc
aatgctgtaaagagaaagaagctggcggcggtggacagcgtcttcaacaagtttgacgac
gaggaagcggacgagcagccccgcaaaaggaagctggttcccctggactacggtgacgat
gacaagagtctgggactcgacggggcagaaatttccgctgccaagggcggcagcatcaac
acagaggagaagcggaagcacatcaagagccttatcgagaagattcccaccgccaggccg
gagcttttctcttacccgctggattgggctatggtcgattcggctctgatggatcgccgg
attagaccgtggattaataagaagatcattgaatacattggggaggaggagcccaccctg
gttgattttgtctgtactaagataatggcacacagcactccccaggggatccttgatgat
gtggctatggtcctcgatgaagaagcagaagtcttcatagtaaaaatgtggaggttactt
atttatgaaacagaagccaagaagattggactggtgaagtaa
DBGET
integrated database retrieval system