Xiphophorus hellerii (green swordtail): 116708594
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Entry
116708594 CDS
T07363
Symbol
dctn1
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04814
Motor proteins
xhe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116708594 (dctn1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116708594 (dctn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116708594 (dctn1)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116708594 (dctn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116708594 (dctn1)
Membrane trafficking [BR:
xhe04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
116708594 (dctn1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
116708594 (dctn1)
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
116708594 (dctn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
MVD-like_N
Motif
Other DBs
NCBI-GeneID:
116708594
NCBI-ProteinID:
XP_032402379
LinkDB
All DBs
Position
19:complement(25710378..25765065)
Genome browser
AA seq
1277 aa
AA seq
DB search
MSQTRRSTYTRTISSGSSRMSSDGGGRPAKVGSLVEVIGKGQRGTVAYIGNTLFASGKWV
GVILDEPKGKNDGTVQGKRYFTCQENYGIFVRQSQIQLVDDGADTSPETPEPTTGRVPKR
EILETSKSAKLRGLKPKKVQHVSLNSTPTTRKTTARRPKQPSRPAGGGGKGAASGSASAS
AGEMSSSEPSTPAQTPLAAPVIPTLHSPGNPPAPGPSKEEEALRAQVKDLDEKLETLKMK
RTEDKAKLKELEKHKIQLEQLQEWKTKMQEQQAELQKQLKEAKREAKEAMEAKERYMEEM
SDTADAIEMATLDKEMAEERAESLQLEVDSLKERVEELTMDLEILKHEIEEKGSDGAASS
YHVKQLEEQNSRLKEALVRMRDLSASEKQEHVKLQKQMEKKNTELDSQRGQKEKLQEEMT
AAEKTIDELKEQVDAALGAEEMVEMLTERNLDLEEKVRELRETVTDLEAINEMNDELQEN
ARETELELREMLDLGAARVREAEKRVEAAQETVADYQQTIKKYRELTAHLQEVNRELTSQ
QEASAELQQQPPAEMFDFKIKFAETKAYAKAIEMELRKMEVAQANRHVSLLTSFMPESFL
RHGGDHDCILVLLLIPRLIHKAELISKQAQEKFDLNENCVERVGLKGGVGEQLSFAGGLV
YSLSLLQATLHKYEQALSQCSVEIYKKVGSLYPEMSVHERSLDFLIDLLHKDQLDETVNV
EPLTKAIKYYQHLYSIHLADQSEDCTMQLADHIRFTQSALDCMAVEVGRLRAFLHTGQEK
ADLAVLLKDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALNFGQQVSDTLSDCRKHLTWV
VAVLQEVAAAGAQMMSPLSEQDGLAAVKLEDVAFKAAEQIYGSQGANPFECLRQSCSIVI
ATMNKMATAMQEGEYDSDKPQSKNPPPVDLRAGALRAEITDAEGLGLKLEDRETVIKELK
KSLKIKGEELSEANIRLSLLEKKLDSSSKDADERVEKIQTRLDEAQTLLKKKEKEFEETM
DALQADIDQLESEKTELKQRINSQSKMTADGLRGSSPSGIASMVSGIAGEELKGNMMAGI
GPGSGVQVIDSPLLSQQIEAQRLCIKHLKNENNRLKAEKMRTQLASLPPLNVTKLPSKEG
RPEVLSSGLYRKTDQLLETLLQMSANVKVVDVTGKSPVTPSAQLLEQTARLQSLTETLDK
LKGEVAEHVVNLQPGARVSSDFATFPSTSFVKATEEKHSDAVLVGRVLVPCPRGQEQVHR
LVLSQSQLQRVHSLLQT
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagaccagaagaagcacatacacccggaccatcagcagcggcagcagcaggatg
agctctgacgggggcgggcggcccgccaaggtgggctccctggtggaggtgatcggcaag
gggcagcgcggcacggtggcctacatcgggaacacgctgttcgcctccgggaagtgggtg
ggcgtcatcctggacgaacccaagggcaagaacgacggcacggtgcagggcaagcgctac
ttcacctgccaggagaactacggcattttcgtcaggcagtctcagatccagctggttgac
gacggcgctgacacctccccggagacccccgagccaaccaccggcagggtccccaaacga
gagatcctggagacgtccaagtctgccaaactgcgaggactgaagcccaaaaaggtgcag
catgtttccctaaactcgactcctacaacccggaagaccacggccagaaggcccaagcaa
cccagccgacctgcgggcggcggagggaagggggccgcgtccggctcggcgtcagcatcg
gccggcgagatgagcagcagcgagcccagcacgccggcgcaaaccccgctggctgcacca
gtcatcccgaccctccactctcctggaaacccgccggcccccggccccagcaaggaggag
gaggccctgcgcgctcaggtgaaggacctggacgagaagctggagacgctgaagatgaag
cgaacggaggacaaagccaaactgaaggagctggagaagcacaagatccagctggagcag
ctgcaggagtggaagaccaagatgcaggagcagcaggcggagctgcagaaacaactcaaa
gaggcaaaaagggaggctaaggaagccatggaggcgaaggagcggtacatggaggagatg
tcggacacggccgacgccatcgagatggcgactctggataaggagatggctgaggagcga
gcagagtctttacagctggaggtggactccctgaaggagagagtggaggagctcaccatg
gacctggagatcctaaagcacgagattgaggagaaaggttcggacggcgccgcctccagt
tatcacgtgaagcagctggaagaacagaatagcaggttaaaggaagctttggtcaggatg
cgcgacctgtccgcgtcggagaagcaggaacacgtgaagctgcagaagcagatggagaag
aaaaacacagagctcgattctcagagaggccagaaggaaaagctgcaagaggagatgacg
gcggcagaaaagacgatagacgagctgaaagagcaggtggacgcagctttgggggcggag
gagatggtggagatgctgacggagcgaaacctggatctggaggagaaagtgcgggagctg
agagagacggtcacagacctggaagctataaatgagatgaacgatgagctgcaggagaat
gccagagaaacggagctggagctcagggagatgttggacctgggagcggccagagtccgt
gaggctgagaaacgagttgaggcggcacaggagaccgtggcggattaccagcagaccatc
aagaagtaccgagagctgaccgctcacctgcaggaggtcaacagagagctgaccagccag
caggaggcctcagcggagctgcagcagcagccgccagcagagatgtttgacttcaagatt
aagtttgcggagacaaaagcttacgccaaggccatcgagatggagctgaggaagatggag
gtggctcaagccaacagacacgtgtctcttctgacctcgtttatgcctgaatccttcctt
cgtcatgggggagaccatgactgcatcctggtcttgctgctcatccccagactcattcac
aaggctgagctgatcagcaaacaagcgcaggagaagtttgacctgaatgaaaactgtgtg
gagcgagtcggcctgaagggcggcgtcggtgagcagctgagctttgcaggcggtctcgtc
tactccctcagtctgcttcaagctactctccacaaatacgagcaagctttgtctcagtgc
agcgtagagatctacaagaaggtgggctctttgtacccagagatgagtgttcatgagcgc
tctctggatttcctcattgacctgctgcacaaagaccagctggacgagacggtcaacgtg
gagccactcaccaaggccataaaatactatcagcacttgtacagcatccatctggcagat
cagagtgaggactgcactatgcagctggctgatcacatcagattcacccagagtgccttg
gactgcatggcagtggaggtgggccgcctgcgggcgttcctgcacacgggtcaggagaag
gctgacttggccgtgctgctgaaggatttggagacttcctgtagtgacatcaggcagttc
tgtaagaagattcgccgcagaatgccaggaacagatgcacccggtatccctgccgcactt
aacttcggacaacaggtgtccgacacgctctccgactgcagaaaacacctgacctgggtg
gtggcagtattgcaggaagtggccgctgctggagctcagatgatgtctcctctcagcgaa
caggacgggctggcggcagtcaaactggaggatgtagcattcaaggctgcagaacagatc
tatggatctcagggtgccaacccctttgagtgtctgcgacaatcctgtagcattgtcata
gcaaccatgaataaaatggctactgccatgcaggagggagagtatgactcagacaagccc
caaagcaagaaccctccaccggtggatctgcgagctggagctcttcgagccgaaatcaca
gatgccgaaggtctgggcctgaagctggaggacagagaaacggtcatcaaagagctgaag
aaatctctaaagatcaagggagaagagctgagcgaagcgaacatccgtctcagtctgctg
gaaaagaagctggacagctcgtccaaagacgctgacgaacgcgtggagaagatccagacc
cggctggatgaggcccagaccctgctgaagaagaaggagaaggagtttgaggagaccatg
gacgccctgcaggcggacatcgaccagctggagtccgagaagacggagctgaagcagcga
atcaacagccagtcaaagatgaccgcggacggactgagaggcagcagcccgtcaggaatc
gcttccatggtttcaggaatagctggagaggaacttaaaggcaacatgatggccggaatc
ggcccgggctccggcgtccaggtgatcgactctcctctgctgagtcagcagatcgaagcc
cagcggctttgcatcaaacacctgaagaacgagaacaaccggctgaaggcggagaagatg
cgcacccagctcgcctctctgccgccgctcaacgtgaccaagcttccctccaaggaagga
cgacccgaagtgctctccagcggcctctaccgcaaaaccgaccagctcctcgagactttg
ctgcagatgagcgccaacgtcaaggtggtggacgtcactggaaaatccccggtgacgcct
agtgctcagctcctggaacagacggcacgtcttcagtccctgacagagactctggacaaa
ctgaagggtgaggtagcagagcacgtcgtcaatctgcagcctggagctcgagtctcgtca
gactttgcaacgttcccttcaacctcctttgttaaggcgaccgaagagaagcactccgac
gcggtgctggtgggtcgagtcctggtgccgtgtccccgcggtcaggagcaggtccaccgt
ctcgttctgtcccagtcccagctgcagagagtccacagtctcctgcagacctaa
DBGET
integrated database retrieval system
