Xiphophorus hellerii (green swordtail): 116708597
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Entry
116708597 CDS
T07363
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116708597
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
116708597
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
116708597
NCBI-ProteinID:
XP_032402391
LinkDB
All DBs
Position
19:complement(25855977..25934688)
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AA seq
682 aa
AA seq
DB search
MSSRVCKHCGSSDIDVDQARGDAVCMGCGSVLEDNIIVSEVEFVETGGGGSLAVGQFVSS
EGGLKNPTFGDGHFSGMGSESRAQTLQRAKQHINTLGHQLQMNQHCLDTAFNFYKMALNK
SLTRGRKSDHIMAACIYLVCRTEGTPHMLLDLSDILQVNVYVLGKTFIALAKELCINAPA
IDPCLYIPRFTQMLEFGEKSREVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARLH
DFCRTTKEIVNVVKVCESTLRKRLTEFEDTPTSQLTIEEFMRVDLDGECDPPCFTAGLRK
KKDQQLKLELQKKIGDFEDEIQEFKDEIDAELESCRPKLRGVYAAYTKKDVFSDDDSSSS
SKEEPNEGDELHAVAKHFGRDLEELTLEALIKLEGGELEEENQEENVPKRKGPSLASILG
RMSSSSSLGLSETFSHSVGDDVENDGTADSGELDLSGIDDSEINLYLLSDKEVQIKTALW
MAENADYLKAQKEKEAKIQKEKELGIYKEKKPRRPSKKHSAIRASTADEAIEKMLEQKKI
STKINYDVLKDLVVKPGSSPAGVGESPKMEPPAPRTPACTRRPVPTRTPLSLSKPLNTLG
KRLQPFISRQPKKKLAVEQTEAPPPPAATAEAPPSAVVVESGPVLYDDVDEEEDEEEETC
VSAMELLGGDGYGCDGDYDDGY
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagggtgtgtaagcactgcggcagctcggacatcgatgttgaccaggcgcgt
ggcgatgccgtctgcatgggctgcggctccgttctggaggacaacatcatcgtctccgag
gtggagtttgtagagacgggcggcggaggctccctggctgttggacagttcgtgtcttca
gaaggtggtcttaaaaatccaacttttggggatggacacttctcagggatggggtcagag
tccagagctcagacgttgcagagagctaaacaacacatcaacaccctgggtcaccagctt
cagatgaaccagcactgcctggacacggccttcaacttctacaagatggccctcaataaa
agcctgacacgcggccgcaagtctgatcacatcatggccgcctgcatctacctggtctgc
cgcaccgagggaacgcctcacatgctgctggatctcagtgacattttgcaggtgaatgtc
tatgtgctgggaaaaaccttcatcgcgctggccaaagaactttgcatcaacgctccagct
atagacccatgtctttatataccccgtttcacccaaatgctggaattcggcgagaagagc
cgcgaggtctccatgacggcactgcgactggttcagcggatgaaaagggactggatgcac
acgggaaggcggccatctggactctgtggagcagctcttcttgttgctgctcgtttgcac
gacttttgtcgcaccaccaaagaaatcgtgaacgtggtgaaggtctgtgagagcacgctg
aggaaaaggctgacggagtttgaggacacgccaacgagtcagctgaccatagaggagttt
atgagggtagatctggacggggagtgtgacccaccgtgttttacagccgggctgaggaag
aaaaaggaccagcagctgaaactggagctccagaaaaagataggtgactttgaagatgaa
atccaggagttcaaggatgaaatagatgcagagctggagagctgcagacccaagctgaga
ggagtttacgctgcctacaccaagaaagatgtctttagtgatgacgatagctcctcgtca
tctaaggaggaaccgaacgaaggcgacgagcttcacgccgtggcgaagcacttcggtaga
gacctggaagagctcaccctagaggctctcatcaaactagaggggggagagttagaggag
gagaaccaggaggagaatgtccccaagcgaaaaggtccctcactggcttccatactgggg
agaatgtcctcctcatcctctctgggcctctcagaaaccttcagccactctgtcggggac
gacgtggagaacgatggcactgctgacagcggagagctggacctgagtggcatagatgac
agtgagatcaatttgtatctgctgagtgacaaagaagtccaaatcaaaactgccctctgg
atggcagaaaatgcagactacctaaaagctcaaaaagaaaaggaagcaaagatccaaaaa
gagaaggagcttgggatctataaagaaaaaaagcccagacggccctcaaaaaagcactct
gccatcagagccagcactgctgatgaggccattgagaagatgttggagcagaagaagata
tccaccaagatcaactacgacgtgttaaaggacctcgtcgtgaagcctgggagcagcccg
gctggtgtgggggagtcaccgaagatggagccgccggcacctaggacgcccgcctgcacc
cgcagacctgtgcccactagaaccccgctgagcctcagcaagccgctcaacactctggga
aaacgattgcagccgttcatcagcagacaacccaagaagaagctggctgtggagcagact
gaagcccctcccccaccggcagcgactgcagaggccccgcccagtgctgttgttgtcgag
agtggacccgtcctgtatgacgatgtagacgaggaagaggatgaggaggaggagacctgt
gtcagtgccatggagctgctgggcggcgacggttatggatgtgacggggattatgatgat
gggtactag
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