Xiphophorus hellerii (green swordtail): 116708645
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Entry
116708645 CDS
T07363
Symbol
atr
Name
(RefSeq) serine/threonine-protein kinase ATR
KO
K06640
serine/threonine-protein kinase ATR [EC:
2.7.11.1
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03460
Fanconi anemia pathway
xhe04110
Cell cycle
xhe04115
p53 signaling pathway
xhe04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116708645 (atr)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116708645 (atr)
04115 p53 signaling pathway
116708645 (atr)
04218 Cellular senescence
116708645 (atr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xhe01001
]
116708645 (atr)
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116708645 (atr)
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116708645 (atr)
Protein kinases [BR:
xhe01001
]
Serine/threonine kinases: Other
PIKK family [OT]
116708645 (atr)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
Check point factors
Other check point factors
116708645 (atr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-HEAT_ATR
PI3_PI4_kinase
FAT
HEAT_ATR
M-HEAT_ATR
UME
FATC
HEAT
DUF2913
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
116708645
NCBI-ProteinID:
XP_032402462
LinkDB
All DBs
Position
19:19047344..19068896
Genome browser
AA seq
2586 aa
AA seq
DB search
MDGLEMSAMIPALQELANASAAEYESAVQKPRQILCQFIDRILTDVDVVALGLNKKSSSE
PACVMLLDFVQHIVKSSSLMFANPACQPAEYPDTIQSCIDFSKWVAVRLLRVGASPGCDV
IHGRVSAVLCSLLHSLRVRVPFIFSCLVREFILMAQDLSNILYAHIAALCGPDVHTQNQW
PVKLERFPFSATRASYLTQTPLVLSSPAALESLTAVALGITTDSLRGVVSCRDLSAAWET
ACSILANGNTRLRKISMAMLRKLVELRKFDETQSHNFFSAFFHLLETHDFSDEKEPYEGE
LLKLTRCLFQSAYVSHSDFESVYLSQMFECVCAFAGAGVKFGSELTESLCVLFSFSLSVV
PSYEGAYLLRRQQVADVCRTLARTVGTENQSECAEGFLQAALKAEKATVMQKTGDGETPA
KRSCKSANSELDMRVGSEVWAALNQRLEELLTVLSSCSAEPESLQALSALQGLALILHLA
ALCSSTLSSCPLVWVSIETVGRVLKSCQSVLEGASRPVSHQEYFKSAFQTTITVLDSVLY
LTLNSQIENGLQRRVCALLSLPWVCENKSASAFKSSGFPSWLSTLAQRLSFCYSHKVQAD
CVSLLAFLRRGVCDGWRVCIFGNALRSQCEAVRATAVEVFPILLHYLGPSHHDLISTALL
SLLEDESEQVKVALARIVGHLSCVQSELSQLCDSDVEASCHSKVLCLRWILAAQHAGNKA
PSLKAAFVKPFIALLRPQAASCVKLAFLEALPHLCQHVNLLGADSDSRAVLCALVGLIED
AEPAVRTRFSQSMRFLLTESTRHSEQDTLSELLVASLKQAFSNAKASRDDDLRKTLILTT
GEIGRASQGSLVSFSLLRLLHCLLSKSSTVSIAAYTQIRALAAAKDLKLQTLFSQYKNPI
CQFLVESLHSRHASALRSTPDQTSESANQRELALDILAQIAHAFDFPDLHRFLTRTLQVL
LPYLAAKASSTGSALIRALAIELKANRREILINNFKYIFSHLVCSCTKEELERAFHYLQS
ETEIELGSLLRQDFQGLHNELLIRLGEHYQQVFNGLAILSSFASNDGPYQGPRDITTPEH
MADYLQPKLLGILAFFNMQLLSSSAGEKDRKKMALTSVMALMRLMGSKHISSVRVKMMTT
LRTGLRYREDFPLLCCQTWECFVRSVEPSHLGPLLSHVIVALLPLIPLRPRETAAIIRFL
ILDNRDEVNDYLHEIYFLPEHPELQDIHTVLQNYKKLTASSSDLASALQLSMRAVQHENV
DVRIHALTSLRDMMHSKQEWLLQQVCASEAVEPVISSLVSVLLKGCQDSSPEARLLCGEC
LGELGAVDPGRLDLSHAHSKGDRSTFVSGVDDPNFAHDLLTELTRTFLAYADNVRAQDSA
AYAIQELLSIFECREGRTDSPGRRLWRRFPEQIQEILEPHLNSRYKSGQKEVNWSKVKKP
VYLSNRGSKFSDWSATWAGYLISKVRHELASKVFKCCSFIIKHDYKVTIYLLPHILLYML
LGCTPAEQQEVTEEMLAVLTKGDGRGGGGVQEAASSLSQLSTQTVFSMLSHLTQWSRHIL
YAKPKVTGDYDRVVAFLKGIPQDVLAKASLRSKAYTRALMHFEAYILENKENIQDHLSFL
QTLYAAMHEPDGVRGVNALRREEPSLREQILEHESIGLLRDATACYDRAIQLESDQIGHY
HGVMTSMLGLGQLSTVITQVNGVLANKQQWKSELNTYRVEAAWKLGKWDLLEDYLSSDQQ
SCTWGVRLGQLLLSAKKQDAESFYEGLKLMRKEQVVPLSAASYECGTYQRGYEYIVRLHM
LSELEHAFTELRGVRDGSAPSLTKLPPHWSDRLEMTQNSFRAKEPILAVRRALLSLRPQP
VCQELVGECWLQSARVARKAGHHQTAFNALLNADNTNLAELVTEKAKWLWTKGDVHQALI
VLQKGVAQCFPDDQLLTDPRSLQIKGKAMLLVGRFMEETANFESNAIMKAYKDVTNLLPE
WEDGNFYLAKYYDKVMPMVTDNKLEKQGNLIRYIVTFFGKALQFGNQYIYQAMPRMLSLW
LDFGAKVCDCEKAGRVDRLMRQEFGKINAVVEEHCSNLAPYQFLTAFSQLISRVCHSSDE
VFKVLMKIVAKVFLAYPQQAMWLMTAVSKSSYPMRMNRCNQILKNAISLKKPLEKFIGDA
NRLTDKLLELCNKPVDGNSTTLSMGVHFKQLKRLVEESTFSQILIPLQSVLIPTLPSTGG
ANTKHDAFPGHWAYLHGFEDGVEILASLQKPKKISLKGSDGRSYTMMCKPKDDLRKDCRL
MEFNCLINKCLRKDAESRRRELHIRTYAVIPLNEECGIIEWVNDTAGLRHILTKLYTERG
AHLSGKELRKFILPKTAPLEEKLRIHKEVLCAQHPPIFYEWFLQTFPDPESWYSSRSAYC
RSTAVMSMVGYILGLGDRHGENILFDSFTGECVHVDFNCLFNKGETFDVPEVVPFRLTQN
MVHAMGPMGTEGLFRQACEVTLRLMRDQREPLMSVLKTFLHDPLVEWSKPSKGLVKTQAN
ETGEIVNEKAKTHVCDIEQRLQGVIKSRNKVLGLPLSIEGHVHYLIQEATDDKMLCQMYL
GWGPYL
NT seq
7761 nt
NT seq
+upstream
nt +downstream
nt
atggatggacttgaaatgtctgcaatgataccggctcttcaagagctagctaatgccagt
gctgctgagtacgaatcagcggtacagaaaccccggcagatcctctgccagttcattgac
aggatactgacggatgtagatgttgttgctctaggcttaaataaaaagtccagttcggag
ccggcctgtgtgatgctgctggattttgtgcaacatatagtcaaatcctcgtctctgatg
tttgctaatcctgcctgtcagcctgctgagtacccagacaccatacagagctgcattgac
ttcagtaagtgggtggcggtgcgtttgctccgcgtcggagcgtctccgggctgcgatgtc
atccacggccgggtctctgctgtgttgtgctccttgcttcactctctgcgggtccgggtg
cccttcatcttcagctgccttgttcgggagttcattttaatggctcaagacctcagcaac
atcctgtacgcccacatagccgcgctgtgtgggccggacgttcacactcaaaaccagtgg
cccgtgaagctcgagcgcttccccttctccgccacgcgtgcctcctacctcacccagact
cccctcgttctctcgtcgcctgccgccttggagtcgctgaccgctgtcgctctcggcatc
acaaccgactctctgaggggagtcgtttcctgtcgcgacctgagcgcggcctgggagacg
gcctgctccatcttggcgaacggcaacaccaggctgaggaagatttccatggcgatgttg
agaaaactggtggagctgagaaagtttgacgagacccagagccacaatttcttctctgcc
tttttccacctgctcgaaacgcacgacttctcggatgagaaggagccctacgaaggggag
ctgctgaagctcacccgctgtttgtttcagtcggcttacgtgtctcactcggatttcgag
tccgtctacctctcgcagatgttcgagtgcgtctgtgctttcgcaggggcaggcgttaag
ttcggatcggagcttactgaatccctctgcgtgctcttcagcttctcgttgtctgtcgtc
ccgagttacgaaggtgcctatctgctgaggaggcagcaggtggcggatgtctgcaggacg
ctggcgcgcaccgttgggacagaaaatcaatctgaatgtgcagaagggttcctccaagct
gcacttaaggctgagaaagctaccgtgatgcagaagacaggagatggagagactcctgcc
aagagatcctgcaaatctgccaacagcgagctggacatgcgtgtcggcagtgaggtttgg
gccgcattaaatcaacgtcttgaagagctgctgaccgttttgagctcatgctctgcagaa
ccagagagcctgcaggccctgtccgcactgcagggcctggccctcatcctgcacctggca
gcgctctgctcctcaaccctcagttcctgtcctctggtctgggtttccattgagactgtg
ggccgggtactgaagagctgccagtcggtgttagaaggagcgtctcggcccgtctctcat
caggaatactttaagtctgcttttcaaacgacgatcacagttcttgactctgttctctac
ctgacattgaacagccagattgaaaatgggctccagcggcgtgtgtgtgccctgctgtct
cttccttgggtgtgtgagaacaaatctgcctcggcctttaagagttcaggctttccttcc
tggctctccactttggctcagagactcagcttctgttattcacataaagtccaggcggac
tgcgtgtcgctgctggcctttctgcgccggggcgtgtgcgacggctggcgcgtctgcatc
ttcggcaacgcgctgcggagccagtgcgaggcggtgagggccactgccgtcgaggtcttc
cccattctgcttcattacctgggaccctcacaccacgacctcatcagcaccgctctgctg
tctctgctggaggacgagtcagagcaggtgaaggtggcgctcgccaggattgtcgggcat
ctgagctgcgtccagtcggagctttcccagctttgcgactccgacgtagaggcctcgtgt
cattccaaagtcctctgccttcgctggattcttgcagctcagcatgctgggaataaagcg
ccatccctcaaagcagcctttgttaaaccattcatagctttactcaggcctcaggctgcc
agctgtgttaaactagcgtttctggaagccctacctcacctctgccagcatgtcaacctg
ctcggtgcggacagcgactcccgcgccgttctctgcgccctggttggcctgatcgaggac
gccgagcccgccgtgaggacgcgttttagccaatccatgcgtttcctgctgacagagtcc
acgaggcactcagagcaggacacgctgagcgagctgctggttgcgagtcttaagcaggcg
ttcagcaacgctaaagccagcagagacgacgacctgcggaagacactcatcctcaccaca
ggagagatcggcagggcttctcagggcagtctggtgtccttctccctgctgcgtctgctc
cactgtctcctgtccaagtcgtccacagtgtccattgctgcttacactcagatcagagcg
ctggcggctgccaaagacctgaagctgcagaccctgttcagccagtataagaaccccatt
tgccagtttctggtggagtcgctgcattcgcgccacgcctccgccctgcggagcacgccg
gaccagaccagcgaatcggccaatcagagagagctggctttggacattctggctcaaatc
gcgcatgctttcgacttcccggacctccaccgcttcctcacccggacgctccaggtgctg
ctgccgtacctggcagccaaggcgagctccacaggctccgccctcatccgcgcgctggcc
atcgagctgaaggcgaacaggagagagattctgatcaacaatttcaagtacatcttcagt
catctggtttgctcgtgcaccaaggaggagctggagagagcatttcactacctacagagc
gagacggagattgagctgggttccctgctcaggcaggacttccagggtctccacaacgag
ctgctgattcgtttgggggaacactaccagcaggttttcaatggtttggccattttgtcc
tcctttgcatccaacgatggtccataccagggtcctagagacatcaccaccccggagcac
atggctgactacctgcagcccaagctgctggggatcctggctttcttcaacatgcagctg
ctcagctccagcgcaggagagaaggaccgcaagaaaatggctttgacgagcgtgatggct
ctgatgcgcctgatgggctccaagcacatcagctccgtcagggtgaagatgatgacgacg
cttcgcacgggtctgcgttacagagaggacttccctctgctctgctgccagacgtgggag
tgttttgtgaggagtgtggagccctcccacctcggacctctcctgagtcatgttattgtt
gccctgctgcccttgatccccctgcggcctagggagaccgccgctatcattcgcttcctc
atcctggacaacagggacgaagtaaacgattacctccacgagatttactttctgcccgag
catccggagctccaagacatccacacggttctgcaaaattacaaaaagctaacggccagc
agcagcgacctggcctccgctctgcagctgtcgatgagagccgttcagcatgagaacgtc
gacgtgaggatccacgctctgaccagcctcagggacatgatgcacagcaagcaggagtgg
ctgctgcagcaggtgtgtgccagcgaggcggtggagcccgtcatctccagcctggtgtcc
gtgctgctgaagggctgccaggactcgtcccccgaggcccggctcctctgcggggagtgt
ctgggcgagctgggggccgtggaccctggacgcctagatctgtcccacgcacactccaag
ggcgaccgcagcaccttcgtgagcggagtagatgatcccaactttgcccatgacctacta
actgagctgaccagaacattcctggcctacgcggataacgtgcgagctcaggactctgct
gcgtacgccatacaggagctgctgtccatttttgagtgtcgcgaggggagaaccgactcg
ccgggccgtcgcttgtggaggagattcccagaacagatccaagaaattctggagcctcac
cttaacagcagatataagagcggtcaaaaggaggtgaattggtccaaagtgaagaagcca
gtgtaccttagcaaccgagggagcaagttttctgactggtctgccacctgggctggatac
ctcatcagcaaggtgagacacgagctggccagcaaggtcttcaagtgctgcagcttcatc
atcaaacacgactacaaagtcaccatctacctgctgcctcacatcctgctctacatgctg
ctgggctgcacgcctgcagagcagcaggaggtgacagaggagatgctggctgtgctgacc
aagggcgacggacgaggagggggcggagtccaggaggcggcctccagcctatcgcagctc
agcactcagactgtgttcagcatgctgtcacacctcacacagtggagccgccacatcctt
tacgccaaacccaaagtcacaggtgattatgaccgtgtggtggccttcctgaagggtatc
ccacaggatgtgctggctaaggcctccctgcggtccaaggcgtacactcgagccctcatg
cacttcgaagcgtacatcctggagaacaaggagaacatccaggaccacctcagcttctta
cagacgctgtacgcggcgatgcacgagcccgacggagtgaggggagtcaacgctctgagg
agggaagagccgtcgctacgggaacagatactcgaacatgagagtattggtttgctgcga
gatgcgacggcttgctacgaccgggccatacagctggagtcagaccagatcggtcactat
catggagtgatgacctctatgctcggcctggggcagctgtccaccgtcatcacgcaggtt
aacggtgtactagccaataagcagcagtggaagtcagagctgaacacctacagagtggag
gccgcctggaagcttggaaagtgggatttgttagaagattatttgagttcagaccagcag
tcgtgcacctggggcgtgcggctcggccagctgctgctgtcggcgaagaagcaggacgca
gagagtttctacgaggggctgaagctgatgcggaaagagcaggtggtcccgctgtccgcc
gccagctacgagtgtgggacctaccagcggggatacgagtacatcgtcaggctccacatg
ctcagcgagctggaacacgcgttcaccgagctgcggggcgttagagacggctccgccccc
agcctcaccaagctgcctcctcattggtcagaccgactggagatgacccagaattccttc
agggccaaggagccgatcctggccgtgcggcgggccctgctcagccttagaccacagccc
gtgtgtcaggagctggtgggcgagtgctggctgcagagcgcccgggtcgccaggaaggcc
ggacaccaccagacggccttcaacgctctgctcaacgcagacaacaccaacctggctgag
ctggtcacggagaaggccaagtggctctggaccaagggcgacgtgcaccaggcgctgatc
gtcctccagaagggcgtggcccagtgttttcctgacgaccagctgctgaccgaccctcgc
agcctgcagatcaaagggaaggccatgctgctggtcggacgcttcatggaggagacggca
aacttcgagtccaacgccatcatgaaggcgtacaaggatgtgaccaaccttctcccagaa
tgggaggacgggaacttctacctagcaaagtactatgacaaagtgatgccaatggtgaca
gataacaagctggagaaacaagggaacctcatccgatacatcgtcaccttctttggaaaa
gccctgcagtttgggaaccagtacatctaccaggcgatgcctcgcatgctctccctctgg
ttggattttggagctaaagtgtgcgactgtgagaaagccggacgagtcgaccgactgatg
cgacaggagttcgggaaaatcaacgcggtggtcgaggagcattgctccaacttggcgccc
taccagttcctcaccgccttctcccagctcatctccagggtgtgtcactccagcgacgag
gtcttcaaggttctcatgaaaattgtggccaaagtgtttctcgcgtacccgcagcaggcc
atgtggctgatgaccgctgtctccaagtcttcttaccccatgcgcatgaaccgctgcaat
cagattcttaagaacgccatcagtcttaaaaagcctctggagaagttcattggagacgcg
aacagactcaccgataagctactggagctctgcaacaagccggtggacggtaacagcacc
accctcagcatgggcgttcacttcaagcagctgaagcggctggtggaggagtccaccttc
agccagatcctcatcccgctccagtccgtcctcatcccgacgctgccctctactggcggg
gcgaacacaaagcatgacgccttccccggacactgggcgtacctgcacggctttgaagac
ggtgtggagattttagcctccttgcagaagcccaagaagataagtctgaagggctccgat
ggacggagctacaccatgatgtgtaaacctaaagacgatctaagaaaagactgccgcctc
atggagttcaactgtctcatcaacaagtgtctccgtaaggatgccgagtcgaggcgcagg
gagctgcacatccgcacctatgccgtgattccactcaacgaggagtgtggcatcatcgag
tgggtcaacgacaccgctgggctgcggcacatcctcaccaagctgtacacagagagaggt
gcccacctgtcgggtaaagagctgagaaagtttattttacccaaaacggctcctttggag
gaaaaactacgaatccacaaggaggtgctctgcgctcagcatccgcccatcttctatgag
tggttcctccaaacctttcctgaccctgaatcgtggtacagcagtcgctctgcatactgc
cgctccactgctgtgatgtccatggtcggctacatcctgggacttggcgatcgccatgga
gaaaacatcctctttgactctttcactggggaatgtgtccacgttgacttcaactgcctc
tttaacaagggggagacatttgacgtgcccgaggtcgttcctttccgacttacccaaaac
atggtccatgctatggggccaatgggtactgagggtttgtttagacaggcctgtgaggtc
acacttaggctgatgcgagaccagagagagccactcatgagtgtgctgaagaccttcctt
catgacccgctggtggagtggagcaaaccatccaaaggcctggtgaaaacccaggccaat
gagacaggagagatagttaatgaaaaggccaaaacacacgtgtgtgacattgagcagcgt
ctccagggggtgataaagagcagaaataaagtgcttggcctccctctgtcaatagaggga
catgtgcactacctcatccaggaagccacagatgacaaaatgctttgtcagatgtatttg
ggttggggtccatacctgtag
DBGET
integrated database retrieval system
