Xiphophorus hellerii (green swordtail): 116708753
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Entry
116708753 CDS
T07363
Symbol
atl1
Name
(RefSeq) atlastin-1 isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116708753 (atl1)
Membrane trafficking [BR:
xhe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116708753 (atl1)
Autophagy
ER-phagy
ER-phagy recepters
116708753 (atl1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
FA_desaturase
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
116708753
NCBI-ProteinID:
XP_032402635
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Position
19:complement(22013920..22032318)
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AA seq
560 aa
AA seq
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MVKHRPERDSWGEWSLSDKNVYEWSSEEEEPDGRARPIQVLLVKDDHTFELDEAALSRIL
LSEEVRDREVVAISVAGAFRKGKSFLMDFMLRYMYNHASENWLGDASEPLTGFSWRGGSE
RETTGIQIWSEVFLVDKPDGRKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYN
ISQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFPYGQDGGMKFLE
KRLKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPHFDGRIKEIDGEFINNL
KILVPWILSPRNIDVKEINGSKITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEANNL
AAVAAAKDLYNKKMEEVCGGDRPFLAPSELQNRHLAIREEALQLFRGVKKMGGEEFSRRY
LQQLEGEIDEVFVQYIKHNDSKNIFHAARTPATLFVVIFVMYVAAGITGFVGVDIIASLC
NMILGLALITLCTWAYIRYSGEYRELGAVIDQVAGALWDQGSTNEALHKLYNVAANHRHL
YHHAFPGADAAAEERDKKKD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaacaccgtcccgagagagacagctggggtgagtggtccctgagtgacaaaaat
gtttacgagtggagctccgaggaggaggagccggacggacgagcccggcccatccaggtg
ctgctggtcaaagacgaccacaccttcgagctggacgaggcggcgctgagtcggatcctg
ctgtccgaggaggtcagggaccgcgaggtggtggccatctccgtggcgggggctttccgc
aagggcaagtccttcctcatggacttcatgctgcgctacatgtacaaccatgcgtctgaa
aactggctcggagatgcgagcgagcctctgaccggcttctcctggagggggggctcagag
agggaaaccaccgggatccaaatctggagcgaggtcttcctggtggacaaaccagacgga
aggaaggtcgccgtgttgctgatggacacgcagggcacgtttgacagccaatccacgctg
agggactcggccactgtgttcgccctgagcaccatgatcagctccatgcaggtttacaac
atatcacagaatgtacaagaggatgacctccagcacttgcagcttttcaccgagtatgga
agactagcgatggaggagacgttccttaaacctttccagtccctgattttcctggttcgg
gactggagttttccatacgagtttccttacggacaggacggcggcatgaagttcctcgag
aagagactgaagatctcagagaaccagcacgaggagcttcagaacgtgcgcaaacacatc
cactcctgcttcaccaacatctcctgcttcctgatgcctcaccccggcctcaaagtggcc
accaaccctcactttgacggaagaattaaagagattgatggcgagttcatcaacaacctg
aagatcctggtgccctggatcctcagcccccgcaacatcgacgtgaaggagatcaacggc
agcaagatcacctgcagaggcctgctggagtacttcaaggcatacattaagatataccag
ggtgaagagttgccacatccaaagtcaatgctgcaggccactgcagaggccaacaactta
gcagcagtcgcagcggcgaaggatctgtacaacaaaaaaatggaggaggtctgcgggggc
gaccggcccttcctggcccccagcgagctgcagaaccgacacttggccatcagggaggag
gccctgcagctcttccgcggcgtcaagaagatgggcggcgaggagttcagccgccgctac
ctgcagcagctggagggcgagatcgacgaggtgttcgtccagtacatcaagcacaacgac
tccaagaacattttccacgccgcgcgcacgccggccacgctcttcgtggtcatcttcgtc
atgtacgtggcggcgggcatcacgggctttgtgggcgtggacatcatcgccagcctgtgc
aacatgatcctgggcctggcgctgatcacgctctgcacctgggcctacatccgctactcc
ggggagtacagggaactgggcgccgtcatcgaccaggtggccggggcgctttgggaccag
gggagcacaaacgaggctctgcacaagctgtacaatgtagcggccaatcaccggcacctg
taccaccacgctttccccggagcggacgccgccgccgaggagcgggacaagaagaaggac
tga
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