Xiphophorus hellerii (green swordtail): 116708758
Help
Entry
116708758 CDS
T07363
Symbol
lrrc4c
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116708758 (lrrc4c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116708758 (lrrc4c)
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
NGL family
116708758 (lrrc4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
Podoplanin
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
116708758
NCBI-ProteinID:
XP_032402650
LinkDB
All DBs
Position
2:complement(15274969..15399925)
Genome browser
AA seq
644 aa
AA seq
DB search
MFNKMTSSQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLTPLVKLDELEMSGNQLSVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTQYKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSPENSSFSYFTTVTVETIETPHNEGFTTTVQQKVSP
TSSASIWESPSPTSSTTTTVRTPLSTRATEKPYTIPVTEGSLNGLDEVMKTTKIIIGCFV
AITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPSLEHE
HLNHYNTYKTAYNHASAMNSIHSSAHEPLLIRATSKDNVQETQI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatgacctcttcccagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttatttgtgctgcttctagccctccagctgctagtagtggca
ggactggtgcgtgctcaaacttgtccttctgtttgctcctgcagtaaccagtttagcaag
gttatttgcactcgcagaagcttgcgagaagttcctgatggcatctctaccaacacacgc
tatttgaatctgcaagaaaatctcatacaggtgataaaggtggacagcttcaaacatcta
agacatttggagattctgcagctgagcaaaaaccacatacgtaaaattgagctgggcgct
ttcaatggactggcaagcctgaataccttggagcttttcgataatagactcaccaccatc
ccaaacggagcatttgagtacttatctaagctaaaggagctctggctaagaaataatcca
atagaaagcattccttcttatgctttcaacagagttccctcattacgaaggttggaccta
ggggagctcaaaaggctctcatacatttcagaaggagcctttgaaggattgagcaatctg
cgctacctaaatttgggaatgtgcaatttgaaggaaattcccaatctcactccattggtc
aaactggatgaacttgaaatgtctggaaaccagttgtctgttatccggcctggttcattt
aaagggcttatccacctgcaaaagctatggatgatgcatgctcaaatccagactatagaa
aggaactcgtttgatgaccttcagtcacttgtggagcttaaccttgcccataataaccta
acgcttttgccccatgatctctttactcctttacatcatttggagagggtgcacttgcac
cataacccctggaattgcaactgtgacatcctgtggctaagctggtggcttaaggagatg
gtacctgcaaacaccagctgctgtgcccgctgcagctcacctacccaatataagggccgc
tatattggtgagctggaccagaattactttcattgttatgctcctgttattgtggagcct
cctgcagacttaaatgtaacagagggaagtgctgctgagttgaaatgtagagccagctcg
ctgacctcagttagctggattacacccaacggttcaataatgacacatggtgcatacaaa
gtcagaatttctgtgctaaatgatgggacactgaatttcacaaatgttaccatgcaggac
acagggacatacacatgtatggttagtaattctgcaggtaacacaacagcctcagccaca
ctgaatgtgtcctctccagagaacagtagcttcagctacttcaccacagtaacagtagaa
acaatagaaacacctcataacgaaggcttcaccaccactgttcaacagaaagtgagcccc
acatcctctgccagtatatgggaaagtccttcacccacctcttctacaacgacaacagtt
cgaaccccactgtccacacgcgcaacagaaaaaccctacacaatacctgtaacagagggc
tcactcaatggtttggatgaggttatgaagacaactaaaatcatcattggctgcttcgtt
gcaatcactcttatggcagcagtaatgctgattatcttctacaagatgcggaagcagcat
caccagcagaatcaccatgcacccacacgcactattgagatcatcaatgtagatgaggac
tgcgtaacaggaggcccaggcatggagggccatcttactctgccgtctctggagcatgag
cacctcaaccactacaatacctacaagactgcctataaccatgcctcagctatgaattcc
atacacagctcagctcacgaacctttgttaatccgggccacctcaaaagacaatgtacaa
gagacccaaatctaa
DBGET
integrated database retrieval system
