Xiphophorus hellerii (green swordtail): 116708830
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Entry
116708830 CDS
T07363
Name
(RefSeq) microtubule-associated protein 1S-like isoform X1
KO
K10429
microtubule-associated protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116708830
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116708830
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116708830
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116708830
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
116708830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Lactamase_B_6
DUF7731
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
116708830
NCBI-ProteinID:
XP_032402770
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Position
19:18843461..18856213
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AA seq
1335 aa
AA seq
DB search
MASGRVLEREVQEEPKTATLDFCPHKYSLLAVIGRTARHRQTEHIRQEIERGIRSWDVDL
KSCNLDLFLQEFLSHHTASFKGAGQKCLRHCTKVLDTQVLISPSQELAHSEVFALLSRDS
AHKLLILAGLSVEESGELLFHRGHLSPDHLRRLITEQFPDQESSTSCPKINLTLSCPNIG
HWRKILLGNPPLQGPLALQINPEEVLPAMESLGEFTSLISGTICPASAFDLLPPPTTVGF
LKLSRPCCYVFPAGRGDCAFFAVNGFTVLVDGGSDSQACFWKLVRHLDRVDAVLLTHVGT
ENLPGAVSFLERKVAEKELSHDVKDDLSKRLISPELGVVFFNAPSRLQAEQHSFADNVLK
STQQAAITLQLLKKLDIRPQPLFRPQGVPVKPLTLFQKMGVGQLDLYILTPGKSSQEYET
FIQNWPDGVSSLSQSLTALVSVSALLVWHPACPQEKVVRVLFPGATPQVKLLQGLEKLKG
LDFLQKPTVTTGDLEKQGEDRKAKRTESLDSGRSIGKEGTAKQGKERGAREEGKDSLVKE
KIKTLSGTKDTDKAKIKEGGIKRKSSLSEKNTLKKGLGKDGKKEEKTGNKEENTVKRTEQ
IKREGVSSKTKKDNKTKPKKDARNDKTGEKKSQKSSANEANNDKKVHANNNVTEQKRGSL
SKIQEPDCPGTDARDHKKETEAEEKQRGSKMSTPEDMTADFVKLKEESELEVAQLETAAY
CEGACNKAGERFIQEVAGGLEITKVEGGDSLVQNIHGRSGKAAADSQRNHPDESIESSKP
AKVVGFPSPLNKSYKNDHTVQQDTTPTEYTLLDGALKHSPPSRSSPENQAPNSPEEETVE
PVSPDSRPNSAGHTPYCLSPDDMWCNRATLNRLQALHSADAYEANGSSGQSEEEVCKTKS
ATENRKEKHLSFLSLGTCKESSSDPSPSVATTTTTTHSLPAEVSSPQSTEVDESLSMSFE
QGPSAGSQREGDDGVYLSHSNGGYYVGMSLPMKKPPRSLGQSSEMGRPAAPNTLPFEASA
HDVDLCLVSPCEFKHFKPPDLSSGTSEACKEVSGPNHHGNNNNNPKDRSPSESNAPVCTE
DCPSTTADGVLDSDSDDSCSDPSNSPCNHDMSQTLPPDPLPAPLRDSPPLPPHPDTSMPV
PQSDSEAHGKRAKNTATRGKKFPGIIDAPQKPGSGKTKTGSQSGAAKGNLSSARTLSSST
RSAPAKSSPAPNSKAPSAGEVSIYVDLTYIPSGASSPTVTVDFFRCIRSSCYIISGNSPE
REELMRQTLDALLDGKGSWPEIMQVTVIPTFESVSMQEWYHQTLDRQRELNITVLGSNST
VAMQEETFPACKIEF
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggccgggtgttggagagggaggtccaggaggagccgaagaccgcaaccctg
gacttctgcccccacaaatactccctgctggctgtcatcggacggacggcccgccacaga
cagacggagcacatccggcaggagatcgagcgaggtattcggtcatgggacgtggaccta
aaatcctgcaacctggatctctttctgcaagagttcctctcccatcacactgcgtctttt
aaaggtgcagggcagaagtgtcttcgccactgtaccaaagtgttggacacacaagtgctg
atcagtccatctcaggaactggctcattcagaggtgttcgccctgctgtccagagactct
gctcataagctgctgatcttggctggcctgagtgtggaggaaagcggagagctgctgttt
cacagaggacacttgtctcctgaccacctcagacgattaataacagagcagttcccagat
caggagagctccacctcctgccccaagatcaatttgaccctcagttgtcccaacatcgga
cactggagaaagatcctcctgggaaatccacccctgcaaggtcccctggcgctgcaaatc
aaccccgaggaggtgctgccggccatggagtctctgggggaattcacatcactcatctct
ggcaccatctgccccgcatccgccttcgacctcctgccacctcccaccaccgtggggttc
ctcaagctgtcccgcccctgctgctatgtgttccccgccgggcgcggcgactgtgctttc
ttcgcggttaacgggttcaccgtgctggtggacggaggctcggactctcaggcctgtttc
tggaagctggtccgccacctggacagagtcgatgcggttctgttgacccacgtgggcaca
gagaacctccccggtgccgtctccttcctagaaaggaaggtggctgagaaggagctgagc
catgatgttaaagatgacttgtcaaagaggcttatctctccagagctaggagttgttttc
ttcaacgcccccagcaggttgcaggcggaacaacattcttttgcagacaatgtgttgaag
agtacacagcaggccgccataactttacagctcttgaagaagttagacatcaggccacaa
ccgttgtttcggccacaaggagtccccgtgaagccgctcaccttgtttcaaaagatggga
gtgggacagctggatttgtacatcctcacaccaggcaagagcagccaggaatatgagacg
ttcatacagaactggcctgacggagtctcgtcactgtcacagagtctcaccgcgttggtc
tcagtctctgccctgcttgtgtggcatccagcatgtcctcaagagaaggtggtcagagtg
ctgttccccggcgcaactccacaggtaaaactgctgcaggggctggagaagctcaaagga
ttggactttcttcagaagccaacagtaactaccggagacctcgaaaaacagggggaggac
aggaaggccaagaggacggagagcttggacagtggccggtcaatagggaaagagggaaca
gccaagcaagggaaagaacgaggagctagagaagaaggaaaggattcattagtgaaagaa
aagataaagacgttaagtggaactaaagatactgataaagctaaaatcaaggaggggggc
ataaaacgtaaatcatcactatcagagaagaatactttaaagaaagggttagggaaggat
ggaaaaaaagaggagaaaactggcaacaaagaggagaacactgttaaaaggactgagcag
ataaaaagagaaggagtctcatcgaaaaccaagaaggacaataaaacaaaaccaaaaaag
gatgcaagaaatgacaaaacaggagagaagaaatctcaaaagtcatcagcaaatgaagca
aacaatgacaagaaagttcatgcaaataataacgtaacagaacaaaaacgagggtctttg
tcaaaaatccaagagccagattgccctggtactgatgctcgagatcacaagaaggagact
gaagctgaggagaagcagcgcggctccaagatgtccaccccggaggatatgacggctgat
tttgtcaagctcaaggaggaaagcgaactggaagtagcccaattggaaactgcagcctat
tgtgaaggtgcatgcaataaggctggtgaaagatttatacaggaagtagcaggtggtttg
gaaataacaaaagtagagggtggtgacagtttagtgcaaaatatccatgggaggagtggg
aaagcagcggcagacagccaacgaaaccatccagatgagtcgatagaatctagtaaacct
gcaaaggttgtaggattcccatctcctttgaacaaatcttacaaaaatgatcacacagtc
cagcaggacacaaccccaaccgagtacacactgctggacggggctttgaagcactcccct
ccctcgcgctcctctccggaaaaccaggcccccaacagtcccgaagaggagacagttgag
ccagtgtcccctgactcacgtcccaacagtgcgggccacactccctactgcctgtcccca
gacgacatgtggtgcaacagagccacgctgaaccgacttcaggccctccattcagctgat
gcttacgaggcaaatgggtcatctggccaaagcgaagaggaggtttgcaagaccaaaagt
gctactgaaaaccgcaaagagaagcatctaagttttctttctttgggcacatgtaaagag
agttcttcggatccctcgccgtctgtagccacaaccaccaccaccacgcactcattacca
gcggaggtgagctcgcctcagtcgacagaagtagatgaatctttgtcaatgtcctttgag
cagggaccgagcgctggaagccagagagaaggagatgatggtgtttatctctcccactct
aatggagggtattatgtgggaatgtctttgccaatgaagaagcctcccagatctttgggt
cagagttcagagatggggcgacccgctgcaccgaacactctcccttttgaggcatcggct
catgacgtggacctttgtttggtttctccttgtgagttcaagcatttcaaaccccctgac
ttaagctcaggcaccagtgaagcctgcaaagaagtcagcggcccaaatcaccatggcaac
aacaataacaacccaaaggacaggtcacccagtgagtcaaatgcccctgtctgcacagag
gactgcccgtccaccacagcagatggagttttggattcggactctgatgattcatgtagt
gacccgtccaactccccctgtaatcacgacatgagtcagactttgcccccagaccctctg
ccagcccctctcagagacagtccaccgctgcctccccatcctgacacctccatgccagtt
ccccagtctgactctgaagctcacgggaagagagcaaaaaacactgcaacccggggaaag
aagtttccagggattatcgatgccccccaaaaaccaggctcagggaaaaccaaaacaggg
agccaaagtggagccgccaaagggaatctctccagcgctcgaacactttcctccagcact
cgctcggcaccagcaaaatcatcaccagctcccaactctaaggctccctctgctggtgaa
gtcagtatttatgtggatttgacttatattccatctggagcctcctctcccacagtcact
gtggacttcttcaggtgcatccgctcctcctgctacatcatcagcggaaacagtccggag
cgagaggaactaatgagacaaactctggatgctctgctggatggcaagggatcctggcca
gaaatcatgcaggtgacggtgatccccacctttgagtcggtgtcgatgcaggagtggtac
caccaaaccctggacaggcagcgggagctgaacatcactgtgttgggctcaaacagcact
gtcgccatgcaggaagagacttttcctgcctgcaagatcgaattctga
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