Xiphophorus hellerii (green swordtail): 116708835
Help
Entry
116708835 CDS
T07363
Name
(RefSeq) dentin sialophosphoprotein-like isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116708835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116708835
Membrane trafficking [BR:
xhe04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116708835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
116708835
NCBI-ProteinID:
XP_032402776
LinkDB
All DBs
Position
19:complement(25478061..25509148)
Genome browser
AA seq
1469 aa
AA seq
DB search
MSSLTVEEDQRWVPTHVQVTVLKGRGLRGKGKHGTSDVYTIIQLGKEKYSTGVAEKTTEP
EWREECSFELQPGVLENAERSGYPAGSNELVLTVMHRALIGLDVFLGQAVIQLDKLFHER
RHVKNDYSHEFETKGEPTALLLVTLWWPIASRWYRLNSKTGKKEKERGDIQVTILFTRNN
LTASMYDLVMKDKGASTFSKLKERMKGKRRSSDEESSSAVVPGGYSSLYRMRQRLPSDGG
GEEDYEDDEGGEVRRSKMRTFFLRGKLRKSSDTRSSTSLGSESSESSSRGGSLSPTAGIS
VVVSDLSNSPSNSSNFTADNSPEHTANISPKSSSLRCEFGDDAGEITIAVPPPTVCVNGS
HASKVQAQDRGSGKPSGSLGSGLLLQRSVAHSVSLQNLSTKPSAELPKGPAGDGRRWSFD
RAGEEERAAIAAALGQSGAGEEERPEPASLPDASQAEPESQVKKQRRNLFSHGRSESAGK
GQSQSKGESEQSAAATEDKHRAWFGSKDSHNKPSLVVSTKLEPSTDPHPPPLPLSRHPPG
VPGDPTSLVSALHHTNPFSRSQTTPPPISQCNPFYSRLQHNPFFTEMLTNQTLKSPLPPL
PYLSSSRPPITDLFPQSSNPDLMQDSPTVEDTADAKDQPVERPLPPVPLVNKEPLIKKLS
NPFLSAEERNLDLEWDESFEAFAAGRLQSPEEFAMESRTQQNTVDDHPLEHDRSKGELQP
VPDANEQTNISDVLYDQPGGRFLSNELPLPIQMRNNNALHFDAFPQFLETIPEHRSFDSD
DSTLNTPTNSPEPTDFIVTEQDSNTTNDFTHTNINAAPFHISSAQLNNNSSSSPDPSSSG
LGSSTEEDVLSCFSSQSEKFSVSSSEEAESTILHFKNSSDSTAVKTIKTSGSGDGIADKS
VDQFLIADSHKTVDQPEDSHAEMVGWNFLGDPFQPLSLTTSEKETESEPGGSQTPKTPDL
NPDLLQTLQPTSVVCQQSSNDGEEESKDCAVDPSEDFSARSKNSATEELMPASSDDEFSS
TLPSVPVIASSPEVKQDLLDVTNENTGSEAQKVRPYSHVEFGIFDEYLNVSHLASSRSQD
FDTAWLNIQTPEQSSNTLRHSHYFSADSQDYLTCDSHSFSNGSVLNETLFSANSTCSGEM
SNVQAVPDDLFGMGHTNLSQSSNFEVNQNEIFGEFLQFHQGNLVNVETSLTGGDGLQVLP
APLPDRSSNTKIHSDIGEGNQNDIFLQSPQGQHAALQRSLSEGTLAPAFDQLFPSSFGSD
PCAIQESSFAQLDPVFPFPNTFAPSLIPESSSFHVAFSALSPLATISATEPPGSEPGATP
QPDVTKRRQAANQPSSPHPVKPLTTAMLAEEKRSVLATGLEKLKSTIHPGRSSQIAEQEA
DRKKALTEGAGSYYHLTHSELVALLVQREAELEGQRAEFERQKLLLAKREVELKKLKPQV
RDLEDYIDTLLVRIMEQKPTLLQVRPKFK
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcactaaccgtagaggaggaccagaggtgggtaccgacgcacgtccaggtgacg
gtgctcaaaggcaggggcttgcggggcaagggcaaacacggcaccagcgatgtgtacacc
atcatccagctggggaaggagaagtactccaccggcgtggcggagaagaccaccgagccc
gagtggagggaggagtgctcgttcgagctgcagcccggcgtgctggagaacgccgagcgg
agcggatacccggccgggagcaacgagctagtcctgaccgtgatgcaccgggcgctgata
ggactggacgtgttcctcggtcaggctgtgattcagctggataaactatttcacgagagg
agacacgtcaaaaacgattacagccacgaatttgagacgaaaggggaaccaaccgctctc
ctcctggtgaccctgtggtggccaatcgcttcaaggtggtatagactcaactccaagact
gggaagaaggagaaggagaggggagacattcaggtcaccatcttgttcacccgaaacaac
ctgacggccagcatgtacgacctggtcatgaaggacaagggcgcctccaccttcagcaaa
ctcaaggagcgcatgaagggcaaaaggaggtccagcgacgaggagtcgtcctccgccgtg
gtgccgggtgggtacagctccctgtaccgcatgcgccagagactgccgagtgacggaggc
ggggaggaggactatgaggatgacgaggggggggaagtccggcggagcaagatgaggacc
ttcttcctgcgggggaagctgcggaagtcgtccgacactcgctccagcacctccctgggc
tccgagagcagcgagtcgtcatcgcgtggcggcagcctgagtccgacggccggcatcagc
gtggtggtgtctgacctgtccaactcccccagcaacagcagcaacttcactgcagacaac
agtccagaacacacagcaaacatttcgcccaagtcgtcctctctcagatgcgagttcggc
gacgatgccggcgaaatcaccatcgcagtgcctcccccgaccgtttgtgtaaacggaagc
catgcgtccaaagtccaggcccaggatcgaggctcaggaaaaccgtcaggttctttaggg
tcgggactgctgctgcagaggtccgtggcccactccgtttccctgcagaacctcagtacg
aagccctccgccgagctgcccaagggccccgcgggggacggccggcgctggtccttcgac
agggccggtgaggaggagagggcggccatcgcggcggccctggggcaaagcggggccgga
gaggaggagcggccggaaccggcatcactgccagacgcctcccaggcggagccagagagt
caggtgaaaaagcagaggaggaacttgttctcacatgggcggagtgagtctgcagggaag
ggtcagagccagtccaaaggcgagtctgagcaaagcgccgccgccaccgaggacaaacac
agagcgtggttcggatccaaggactcgcacaacaaacccagcctggtggtctccactaag
ttagagcccagcactgacccccacccaccacctcttccacttagtcgccaccccccgggt
gtccccggtgatcctacctctttggtttccgcactgcaccacactaaccccttttcccgt
tcacagaccacaccgcctcccatatcccagtgcaaccctttctactcccgcttacagcac
aaccccttctttacagaaatgttaactaaccagacactgaagtcaccgctgcctcctttg
ccttatctttccagctcccggccccccataaccgacctctttccacagtcaagtaatcct
gacttgatgcaagacagcccaacagtagaggacacggctgatgccaaagaccaacctgtt
gagagacctctccctccagttcccttagtaaataaagaacctttaatcaagaagttgtca
aacccctttctgtctgctgaggagcgtaacctggacttggagtgggacgaatcatttgag
gcttttgcagctggcagactgcagtctcccgaggagttcgccatggaaagcagaacacag
caaaacacagtcgatgaccatccactggaacacgaccgtagtaaaggtgaattacaacca
gtcccggatgcaaatgagcaaacaaatattagtgacgttctctatgatcagcctgggggc
agatttttatccaatgaacttccacttcctatccagatgaggaacaacaacgcacttcac
tttgacgcctttccacaattccttgaaacgatcccagaacacagaagctttgacagcgat
gactcgacgttgaacactcctactaactcccctgaaccgactgattttattgtgaccgaa
caggacagcaacactactaatgattttacgcacactaatatcaatgctgctccctttcac
atctcatctgcacaactcaacaacaacagcagcagctctccagaccccagctcatcgggc
ctcggcagttcgacagaagaagacgtgctctcctgtttttcatctcaatctgagaaattc
tctgtgtcgtcctctgaggaagcggaaagcaccatccttcacttcaagaattcctccgac
tcgactgctgtaaaaaccataaagacctcagggtctggagacggcatcgctgacaagtcc
gttgatcagtttttgattgctgattcacataaaactgttgatcaaccagaggatagtcat
gccgaaatggttggttggaactttttaggggacccgtttcagcctctttctctgacgacg
tcggaaaaggaaacagaaagtgaacctggaggtagtcaaacacctaaaactcctgatctg
aaccctgatctgttgcagacactacaaccgacgtctgttgtgtgtcagcaatcaagcaat
gatggtgaagaagaaagtaaagattgcgctgtcgatccttctgaggatttcagtgctcgt
tctaagaacagtgccacggaagaattgatgcctgcttcttcagacgatgaattctcttcc
acactaccatcggtacctgtcatagcctcatcccctgaggtcaaacaagatttgttggat
gtgaccaatgagaacactggttctgaggcgcagaaagttcgcccttattctcatgtggaa
tttgggatttttgatgaataccttaatgtcagtcaccttgcaagcagtcgtagccaggac
tttgacaccgcttggttgaacatacagacccctgaacagagtagcaacaccttgcgccat
agccattatttcagcgctgactcgcaggactacttaacctgtgattctcactcattctcc
aacgggtcagtgctgaatgaaactctattctcagctaactctacttgcagtggtgagatg
agcaacgttcaggcagtccctgatgatctttttggaatgggtcatacaaatctatcgcag
tcatcaaactttgaggtcaaccagaatgaaatatttggagaatttctccagttccaccaa
ggcaacttggtgaacgtcgagacaagcctgacagggggcgatggattacaggttctgccg
gccccactgccagacaggagctctaatacaaagatccacagtgacataggggagggaaat
cagaacgacatcttcttacagtctccacaggggcagcatgccgcgctgcagcgctccctt
tccgaggggacgctggcacctgcctttgaccaacttttcccgtcctctttcgggagcgat
ccctgcgcaatacaggaatcctcctttgctcagctagaccctgtcttccctttccctaac
acatttgctccttctctaattcctgaaagcagtagcttccatgtagcgttctctgccctc
tctcccctcgcaaccatttcggcgacagagccacccggctcagagcccggcgccacacca
cagccggatgtgaccaagcggcggcaagcggccaatcagccgagcagcccccacccagtg
aagcccctgaccactgccatgctggctgaggagaagcggtcagtgctggccaccggcctg
gagaagctcaagtccaccatccatccagggaggagcagccagatcgccgagcaggaggca
gacaggaagaaggctctgacggaaggagcgggctcgtactaccacctgacccacagcgag
ctggtggccctgctggtgcagcgcgaggccgagctggaggggcagagggccgagttcgag
cgtcagaaactgttgctggccaagcgggaggtggagctgaagaagctgaagcctcaggtc
cgagacctggaggactacatcgacactctgctggtgcgaatcatggagcagaagccaacg
ctgctacaagtgcgccccaagttcaaatga
DBGET
integrated database retrieval system
