Xiphophorus hellerii (green swordtail): 116708889
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Entry
116708889 CDS
T07363
Name
(RefSeq) transformer-2 protein homolog alpha-like isoform X1
KO
K12897
transformer-2 protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116708889
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116708889
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116708889
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116708889
Spliceosome [BR:
xhe03041
]
Common components
Common spliceosomal components
SR proteins
116708889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
GRP
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
116708889
NCBI-ProteinID:
XP_032402900
LinkDB
All DBs
Position
19:17914019..17917452
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AA seq
300 aa
AA seq
DB search
MSDNEKDFREQDSRGGSRSASPRGSAKSASHSPARSKDGSRRSRSRSRSQSRSKSRSRSH
RSSHRRYSRSRSHSRRRRSRSRSRSSDYRRRRSHSRSPMSNRRRHIGNRANPDPSACLGV
FGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFENSADSKEAKERANGM
ELDGRRIRVDFSITKRAHTPTPGIYMGRPTYGGGGGGGGGGGGGGSGGGGGGGSSRRFSR
DYDRGYDRGYDRGYDRDYDRYEEREYRSYSSFSCDRRRSPSPYYSRGYRSRSRSYSPRHY
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacgagaaggattttagggagcaggactctcggggaggctcaaggagtgca
tccccaagaggctccgcaaaatccgccagccactctcctgcacggtctaaagatggctct
cggcgctcccggtccagatctcgctctcagtccagatcaaaatccaggtcaaggtcccac
cgaagctcgcacaggcgctactcccgctctcgttcccactctcgacgcagacgttcaagg
agccgatctcgaagctcagattaccgtcgacgtaggagccacagccgttccccgatgtcg
aatcggcgcagacacattggcaacagggccaacccagaccccagcgcttgcctgggtgtg
tttggtctgagcctttacaccactgagagggacctgagagaggttttttctaaatatggc
cctttggccgatgtcaacatagtgtatgatcagcagtcgcgtcgttcaagaggttttgcc
tttgtttatttcgaaaacagtgcggactccaaggaggccaaggagcgggctaatggtatg
gagcttgatggtcgcagaatcagagtggatttctctatcaccaaaagagctcacactcca
actcctggaatctacatgggacgccccacatatggtggtggcggtggtggtggaggagga
ggaggcggtggcggcagtggtggtggtggaggcggtggttcatcacgccgtttctctagg
gactatgacaggggctatgacagaggatatgatagaggttatgatcgcgactatgatcgc
tacgaagagcgagagtaccgatcatacagttctttttcctgtgacagacgcagatctccg
tctccatactacagcagaggttaccgctcacgatctcgatcctactcgccacgtcactac
tag
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