Xiphophorus hellerii (green swordtail): 116709004
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Entry
116709004 CDS
T07363
Symbol
cldn20
Name
(RefSeq) claudin-20
KO
K06087
claudin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03272
Virion - Hepatitis viruses
xhe04382
Cornified envelope formation
xhe04514
Cell adhesion molecule (CAM) interaction
xhe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116709004 (cldn20)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116709004 (cldn20)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116709004 (cldn20)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116709004 (cldn20)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116709004 (cldn20)
04147 Exosome [BR:
xhe04147
]
116709004 (cldn20)
Cilium and associated proteins [BR:
xhe03037
]
Other cilia and associated proteins
Stereociliary proteins
116709004 (cldn20)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
116709004 (cldn20)
Exosomal proteins of colorectal cancer cells
116709004 (cldn20)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
tRNA_NucTran2_2
Motif
Other DBs
NCBI-GeneID:
116709004
NCBI-ProteinID:
XP_032403109
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All DBs
Position
19:9519608..9525513
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AA seq
242 aa
AA seq
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MASTGMQIFGFVLALLGIMGATVATLLPNWKVSADVGSNIITAISQMQGLWMDCTWYSTG
MFSCTLKYSVLSLPAYLQTARTTMVLCCVLAAMGLCLASLGLKCTRWGGGRRSKRHAAIA
SGGCFVTAGFLCLVPASWFTKEVITNFLDSSVPESNKFEPGGAVYVAFVSAGFLFVGGSI
FCMSCPGKRHGPQDLVLLPPPDKLLLQQQQQQLLQQQQELQHQYCSLSPLDNKTGYSLQD
YV
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggcatccactggcatgcagatatttggatttgtcctggcgctgctgggcattatgggg
gccacggtggctaccctgctacccaactggaaggtcagcgcagatgtgggctccaacatc
atcacggccatctcccagatgcaggggctgtggatggactgcacctggtacagcaccggc
atgttcagctgcacgctcaagtactcagtgctctctcttcctgcgtacttgcagactgca
cgcaccaccatggtgctctgctgcgtgttggccgccatgggcctctgccttgcttctctg
gggctgaaatgcacacggtggggaggcggacgccgttccaagcgacacgccgccatcgcc
agcggaggctgctttgtcaccgctggctttctctgtctggtgcccgcttcttggtttacc
aaggaggtcatcacaaacttcttggactccagcgtgccggagagcaataagtttgagccc
gggggtgccgtgtatgtggcctttgtttcagcaggtttcctttttgttggagggtccata
ttctgcatgtcctgcccggggaagagacacggccctcaggacctggttctgcttcctccg
ccggacaaactgctgctccagcagcagcagcaacagctgctccagcagcagcaggagctc
cagcaccagtactgctctctctcccctttagacaacaagactggctacagcctgcaggac
tacgtgtaa
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integrated database retrieval system
