Xiphophorus hellerii (green swordtail): 116709122
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Entry
116709122 CDS
T07363
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116709122 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116709122 (mlh3)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
116709122 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
DNA_mis_repair
HATPase_c
MutL_C
WW
Motif
Other DBs
NCBI-GeneID:
116709122
NCBI-ProteinID:
XP_032403360
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All DBs
Position
19:complement(12461021..12468880)
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AA seq
1151 aa
AA seq
DB search
MIRCLPAEIQGKIRSGVAIPSLQQCVEELILNSIDAGATCVGVRIDMEAFKVQVIDNGSG
MTVEDMERVGTRYHTSKCSSIEDLENLKCYGFRGEALASIVSLATLVEISSRTRLSVKTH
VKLFKDGQGMDVFEAEEVRPSVGTTVIICNFFHNMPVRRKRVDAVLEVERIRQRVEAVSL
MHPSVSFTLKNDYTGAMMVQLPKARDTYHRFVQIHNLTRAEKLGEISHTHKQFEVTGYLG
KEGHYNNSLQYLYVNDRLLLKTRIHKLLNCLLRRLSSSNQKLDSPDGISVTRNPKLKRNQ
DQYGVYIISIKCSYSEYDICLEPAKTLVEFKDWDGVLLCIEEAVRAFLRRENLVSLFSQE
DLECVSPKGFSIERTDQKVETETAGQGDVGTSTLDCGVGTKLASNFVHRRRADDSVCLES
DLIESRADEAQRYEQMEIAFSECKETPQRDLELASTDINKGKQAFTEAPDNLDNQKRQDC
AEEETQQSTSDSHLPISQIPMSQLDLNLNKQILQHPGRKIRLSDPYVHQSLSIQDVSHRD
KPLFQVQDLGLNCKEKLTASKRKMTLESNGDLAPFIPSKISRVIPVEKLATFKQPGSLDK
FRQTYSKSVDMKFQHHQPQNDTHLFQTSSFAKNLHSLSAFEGNNRDQVSDSGEEGIEQTI
SLNPATLTANHNKSKISLAAKLCHLKQHMTEDEELLQHTHRNISEDKNSLTFPTDGTQYR
ISNQNPQNHKVPIHPLSDSSCKQLAGDEGDSRCNDWLHHYDASVGKTVYINKKTGLSRYK
APALEETQAPCTSDVSNMAVSVISEMGVECMCYPFQLDLVLPFLPKSGQGRVISSGTDCR
DDADQSANSLSALYSKWKNPVFVRPPTVGVDISSGQADGLAVKIHNILFPYRFSKNMIHS
MKVVNQVDKKFLACLINAREGGSAEQNENEGNLLVLMDQHAAHERVRLENLVADSYEDDP
DASGKKRLCSSTILPPLGISVTEEELRLLRSSQPQWRNLGLEVTFSKTGALQVFVGKVPL
CFMEKESNELRRGRPSVIKPVVEEYLREQTELLRLTGRVGGTLPLTVLKVLASLACHGAI
KFNDTLSRDECRSLVASLSSCQLPFQCAHGRPSIVPLVDILHLDKDQKDFQKPNLQKLRR
MYRAWELYGNK
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgataaggtgtttgccagcggagattcaggggaagattcgctccggtgtggccatcccg
tccctccagcagtgcgtggaggagctcattttaaatagcatcgatgctggggccacctgt
gtgggggtcaggatagacatggaggcctttaaagtccaggtgatcgacaatggatctggg
atgactgttgaggacatggagcgagtgggaaccagataccacacaagtaaatgcagctct
attgaagacctagagaacctgaaatgttatggctttagaggagaagcgttggcgagcatt
gtttctttagctacgcttgtggaaatctcctcccggaccagactgtcagtgaaaacacat
gttaaactgttcaaggatggacaaggcatggacgtcttcgaagccgaggaggttcgtccc
tccgtagggacgactgttatcatctgtaatttcttccacaacatgccagtccggaggaag
agagtggatgcagtcctggaggttgagaggatcagacaaagagtggaggctgtgtccctg
atgcatccttctgtctccttcaccctgaagaatgactacacaggggccatgatggtgcag
cttcctaaagccagagacacctaccaccgctttgttcagatacacaacctgactcgggca
gagaaactgggagagatcagccacacacacaagcagtttgaggtgactggttacctaggc
aaagagggacactacaacaacagcctgcagtatctgtacgtgaacgacaggcttctgctg
aaaacacggatccacaagctgctaaactgtctcctccgcaggctgagcagctcaaaccag
aagcttgacagcccagacgggatatctgtgacccggaatccaaagcttaagcgaaaccag
gatcaatatggagtctacatcatcagtataaaatgttcttattctgagtatgatatttgt
cttgagccagcaaaaactctggtggagttcaaagactgggatggggttttgctttgcata
gaagaagcagtgagagcttttctgaggagggagaacttggtctctctgttttctcaagag
gacttggaatgtgtgtcccctaagggttttagtattgaaagaacagatcaaaaagtggaa
actgagacagctggccaaggagatgttggcacatccacactggactgcggcgttggaacg
aaactggcatctaattttgttcatcgtaggagagcagatgacagcgtttgcctagagtca
gacctgattgagagcagagctgatgaagctcaacgatatgaacagatggagatagctttc
agtgaatgtaaagagacaccacaacgtgatctggagcttgcatcaactgatataaacaaa
ggcaagcaagcattcaccgaagccccggacaatttagacaaccaaaagagacaagactgt
gcagaagaagaaacccagcagagcactagtgattcacatttacccatcagccaaattcca
atgtctcagcttgatttgaaccttaataaacaaatattgcagcatcctggcagaaagatt
agattgtctgacccatatgttcaccaaagtctctcgattcaagatgtatctcacagagac
aagcctttgtttcaagttcaagatttggggctgaattgtaaggagaaattaactgcatca
aaacgcaaaatgacacttgaatcaaacggagaccttgctcctttcatcccctcaaagatt
tccagagttattcctgttgagaagttggcaacattcaagcaacctggatcgcttgataag
tttagacaaacatacagcaagtctgttgatatgaaatttcagcatcatcagccacagaat
gacactcatttattccagacatcaagctttgctaaaaatcttcatagtttgtctgctttt
gaaggcaataatcgagatcaagtttcagactctggagaagaagggatagaacagaccatc
tccctaaatccagcaacactcacagctaatcacaacaaaagtaaaatatctttggcagct
aaactttgtcatttaaaacagcatatgacagaagatgaagaactcttgcagcacactcat
aggaatatttcagaggacaaaaacagtctcacttttcctacagatggtacgcaatacaga
atcagcaatcagaatccacagaaccataaagttcccattcaccctttatcggacagcagt
tgtaaacaactggctggtgatgagggtgactcgaggtgtaatgactggctccatcattac
gatgcatctgttggaaaaactgtttatatcaacaaaaagactgggctcagcagatacaag
gcaccggctttagaggaaacacaagcaccttgtacatctgatgtctccaacatggctgtt
agtgtcatctctgagatgggtgtggaatgcatgtgctacccatttcagctggatttagtg
ttgcctttcctgcctaaatccgggcaaggaagagtgattagctcagggactgactgtaga
gacgatgctgatcagagcgccaactctctttctgcattgtactctaaatggaaaaatcca
gtgtttgtccgcccacctacagttggtgtggatatatccagcggacaagctgatggacta
gctgtgaagatccataacatcctctttccataccgcttttctaagaatatgattcactca
atgaaggttgttaatcaagtggataaaaagtttcttgcctgcctcattaatgcaagagaa
ggaggttcagcagaacagaatgaaaatgaaggaaaccttctggtgttgatggatcaacat
gcagcacatgagagagttcgacttgaaaatttagttgcagattcatatgaagatgaccca
gatgccagtgggaagaaacgtctttgttcatcaaccattttaccacctttggggatcagc
gtgacggaagaagagctcaggctgcttaggtcttctcagccacagtggaggaatttgggc
cttgaagttactttctcaaagacaggagctctgcaggtgtttgtgggaaaggtaccgctg
tgcttcatggaaaaagagagtaatgagctcaggcggggcagaccgtctgttatcaagcca
gttgttgaggagtatcttcgagagcagactgagttactccgtctaacaggcagagtcgga
ggaactttgcccctcactgttttgaaagtacttgcctcactggcgtgtcatggtgccatc
aagtttaatgacactctaagccgggacgagtgccgcagcctggtcgcatccttgtcttca
tgccagctgcccttccagtgcgcccatggccgtccctccattgttccgctagtagacatc
cttcatctggacaaggaccagaaggattttcagaaacccaacctgcagaagctaagaaga
atgtatagagcatgggagctgtatggaaataaataa
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