Xiphophorus hellerii (green swordtail): 116709132
Help
Entry
116709132 CDS
T07363
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2-like
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116709132
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116709132
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
SALM family
116709132
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116709132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
fn3
LRR_5
Ig_2
LRR_9
LRRCT
LRR_14
Ig_DSCAM-DSCAML_C
Sp38
Motif
Other DBs
NCBI-GeneID:
116709132
NCBI-ProteinID:
XP_032403376
LinkDB
All DBs
Position
19:15229537..15401525
Genome browser
AA seq
788 aa
AA seq
DB search
MDKVVICLLILGTAMTMVHACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLG
GNFILKVTTQDFANMTGLVDLTLSRNTISSIQPFSFIDLETLRSLHLDTNRLTELGADDL
RGLINLQHLILNNNQLNQISDSAFDDLMLTLEDLDLSYNNLRSVPWEAIRKMVNLHQMSL
DHNLIAFIAEGTFTDLEKLARLDLTSNRLQKLPPDPIFARSQSSMVMSTPYAPPLSLSFG
GNPLHCNCEVLWLRRLDREDDMETCASPASVKGRYFWSVREEEFVCEPPLITQHTHKLLV
LEGQTASLRCKAVGDPMPTVHWVAPDDRLIGNSSRATVYENGTLDIAVTTSKDYGIFTCI
AANAAGESTASIELSIIQLPHITNNTNRTTLPKSGLSDITSSTKIGKGEPKPPPEKVVSV
SEVTAISALVKWTVSKSTPKVKMFQLQYNCSDDEVLIYRMIPRTHRAFVVTNLVPGMQYD
LCVLAIWDDTATTLTATNIVGCIQFVTTEDYPQCQSLHSGFMGGTMILVIGGIIVATLLV
FIIILMVRYKVTSGIQTSKLPTVSNTYSQTNGGVNRFNGAPPQVKSTVVVMREEMVEFKC
GSLQSSLSSSSSSSNSLDSQTGRGAGYNAQSSECSNLPSTKFRRHVHGTKARQNLDQLLG
AFTSLELRGAAKDHQGASVSSSCAVANPMTTVAVAPPSDKEPLLGRAESTTMLGRLLGFQ
HEDKPKRSHSFDMGHVGAVQCRSSQPRRISNIWTKRSLSVNGMLLQYDDSEDEKPTFESS
EWVMESTV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtggtcatctgcctcctgattctgggaaccgctatgacaatggtccatgca
tgtcccaaatactgcgtctgtcagaacctctcggagtctctggggaccttgtgcccctca
aaaggtctgctttttgttccaccagacatagaccggagaactgtagagctccggttggga
ggcaatttcattctcaaggtcaccactcaggactttgccaacatgacaggtctggtggat
ctcactttgtctcgcaacaccatcagcagcatccagcctttttcctttattgatctagag
acattgaggtcactgcaccttgacaccaaccggttgactgaactgggagcggatgaccta
cgagggttgatcaatctgcagcacctgatcctcaacaacaatcaactaaatcaaatctca
gattcagcttttgatgatttaatgctgactttggaggatttggatttgtcttacaacaac
ctgcgtagtgtgccttgggaggccatccgtaagatggtcaacctgcatcagatgagtctg
gaccataacctcatcgccttcattgctgaggggacttttacagaccttgaaaaactggct
cgcctggatctgacatccaatcgcctccagaagcttcctccagacccaatttttgcacgg
tcccagagcagcatggtgatgagtacaccatatgcacctccactctctctgagctttggt
ggaaacccactgcactgtaactgtgaggtactgtggctacgaaggctggatcgtgaggat
gatatggaaacatgtgcctctccagccagtgtaaaggggcgctacttttggtctgttcgt
gaggaggaatttgtctgcgagcccccattgatcactcaacatacgcacaaattgctggtg
ctggagggccaaacagctagtttacgttgtaaagcagtcggagatccaatgccaactgtg
cattgggttgctccagatgatcgcttgattggcaactcctcaagagccactgtatatgaa
aatggcacccttgacatagcagtcaccacatccaaggactatggcattttcacttgtatt
gctgctaacgccgcaggggagtctactgcctccatcgagctatcaatcattcaactgccc
cacatcactaacaacactaatcgtactacactgccaaaatcaggactttcagacatcaca
agctctactaagataggcaaaggggagcccaagcctcctccagaaaaggtggtttctgta
tctgaagtgactgccatctctgctttggtcaagtggaccgtaagcaaatcaactccaaag
gtcaaaatgttccagcttcagtacaactgttcggatgatgaagttctcatttacaggatg
attcccaggactcaccgggcctttgtagtcaccaatctggtgccgggaatgcagtatgac
ctgtgtgtattggccatctgggatgacacggcaaccactctcactgccaccaacattgtt
ggatgcatccagttcgtcaccacagaagattacccacagtgccagtctctgcacagtgga
tttatgggtggcaccatgattctggtcattggtggcattattgttgcaactctgctggtc
ttcatcatcatccttatggtgcgctataaggtaaccagtgggattcaaaccagtaaatta
cccactgtaagtaacacatactcccagacaaatgggggagtgaacaggttcaatggagcc
ccaccacaggtcaagtccacagtagtagttatgcgtgaagaaatggtggagtttaagtgt
ggatccctccagagtagtctttcttcgtcatcatcgtcctctaactcgttggacagccag
acaggaagaggagcaggctataatgcgcagagcagcgaatgcagcaacctgccaagtacc
aagtttaggaggcatgtgcacggcactaaagctcggcaaaacctggaccaacttttaggg
gcctttacgtcactagagctacggggtgcagcaaaggaccaccaaggagcttctgtctcc
tcatcctgtgctgttgccaatcccatgacaacagtggctgtggcaccaccatctgacaaa
gaacccctgcttgggagggctgagtccacaacaatgctagggcgactacttgggtttcaa
catgaggataaacccaagaggagtcactcattcgacatggggcatgtcggggcagtgcag
tgtcgcagcagtcagccacgtaggatcagtaacatctggactaaacgcagcctgtctgtt
aacggtatgcttctgcagtacgacgacagtgaggatgagaaacccacttttgagagctct
gagtgggttatggagagcacagtctaa
DBGET
integrated database retrieval system
