KEGG   Xiphophorus hellerii (green swordtail): 116709144
Entry
116709144         CDS       T07363                                 
Name
(RefSeq) calpain-1 catalytic subunit-like
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04141  Protein processing in endoplasmic reticulum
xhe04210  Apoptosis
xhe04217  Necroptosis
xhe04218  Cellular senescence
xhe04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116709144
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    116709144
   04217 Necroptosis
    116709144
   04218 Cellular senescence
    116709144
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    116709144
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:xhe01002]
    116709144
Enzymes [BR:xhe01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     116709144
Peptidases and inhibitors [BR:xhe01002]
 Cysteine peptidases
  Family C2: calpain family
   116709144
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_1 EF-hand_7 EF-hand_6 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 116709144
NCBI-ProteinID: XP_032403389
LinkDB
Position
19:1347491..1368222
AA seq 694 aa
MLAPGVCMDIISARHSKDGYGTVSNPEKFLNQDFQQLKEYCVIRRVRFIDDMFPPDHRSI
GRDILQPADLVRVEWVRPSKIVPNPSFIVDGVSRFDFGQGMVGNCWFLASIGALTFQDLV
LKQVVPLEQTFDEDYCGLFHFRFWRFGKWVDVVIDDKLPTINGQLIFVHSKNPTEFWPAL
MEKAYAKVCGSYADMNAGTPVEALVDFTGGVHMCVQLSEPPADLWELMCRAGQAKSLMGC
GTPQGETSANTVLPNGLVQGHAYAVTGVKEVLSRAKAERLVRLWNPWGQGEWSGDWSDRS
PLWQTVSPQDRETCLSVREDGEFWMTLQDFCKFYSDLDICCSCPDFLDGSSSCHWKSSFY
EGRWVAGISAGGCMNHPGTFWTNPQYRVQVAGSDSQGEKNMLVSLMQKPDKRNRRLVQNL
HIGFSVFEVPKEFRAVRGKFTAHFFSTNKPVAQLENYPNAREVMQLLSLKPGEFLIVPST
YSPNETASFILTVLSKTETHVYESSGGNDPDQVETEKPSAPVSAAVEDSNRTLFRQYSDK
YEEVDAEQLQSLLNGKILRGDLKSGGFSTDACRSMVALMDTSITGKLNSEEFVSLWRKIV
SYKDIFSHCDVSQTGTLSLSELRKAIMASGKTISDGMLNIMALRYGASSGFITLENFIAL
ALRFDRMYQIFRELSDGGAVTLREPEWMNLVIYS
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgctcgctccaggcgtctgcatggacatcatcagcgctcgtcactctaaagacggatat
ggaaccgtttccaaccccgagaagttcctgaaccaggacttccagcagctgaaggagtac
tgcgtcatccgccgggtgaggttcatcgacgacatgttcccccccgaccaccgctccatc
ggcagggacatcctgcagccggccgacctggtccgggtggagtgggtcagaccgtcgaaa
atagttcccaacccttccttcattgttgacggagtctccagatttgactttggccaagga
atggttggaaactgctggtttcttgcctccatcggagcgctgaccttccaggacttggtc
ctgaaacaagtcgttcctcttgagcaaacatttgatgaagattactgcggcctgttccac
ttcaggttctggaggtttggaaaatgggtcgacgtagtcattgacgataagctgccaaca
atcaacggccagttaatttttgtccactctaagaacccgactgagttctggcccgctctg
atggagaaggcctacgccaaggtctgtggctcctatgcagacatgaatgcaggaactcca
gtggaggccttggtggacttcaccggcggcgtccacatgtgtgtgcagctgtctgagccg
cctgcagacctgtgggagctgatgtgcagagccggccaggccaagtcgctgatgggctgc
gggactccgcagggagagacttctgccaacactgtcttaccaaacggcctagttcaaggc
cacgcctacgccgtcactggagtcaaggaggtgctgagcagagcgaaggctgagcgtctg
gtgcgtctgtggaacccctggggccaaggagagtggagcggagactggagcgaccggtcg
cctctgtggcagacggtgagtcctcaggatcgggaaacctgcctttcagtgcgtgaagac
ggcgagttctggatgactctgcaggatttctgtaagttttactctgacctggacatctgc
tgctcgtgtccggacttcctcgatgggagctcgtcctgtcactggaaatcctcgttttac
gaaggccgatgggtcgcagggatctcagctggaggctgcatgaatcaccctgggaccttc
tggaccaatccgcagtaccgggtgcaggttgcaggctcagacagtcagggtgagaagaac
atgctggtgtctctcatgcagaagccggacaagaggaacaggcggctggtccagaacctc
cacataggcttctctgtgtttgaggtgcctaaagaattcagggctgtgagggggaaattc
acagcccatttcttcagcacaaacaagccggtggctcagttggagaactaccccaacgcg
cgggaggtgatgcagctgctgagcctgaagcccggagagttcctgatcgtcccgtccacc
tacagccccaacgagacggcgtccttcatcctcaccgtgctgtccaagaccgagacacac
gtctatgagagttctggtggaaacgacccggatcaggtggagacagagaagccctctgct
ccggtcagcgcagcggtggaagacagtaacagaaccctgttccgacagtactctgacaag
tacgaagaagtggacgccgagcagctgcagagcctcctgaacggcaaaatcctgagaggt
gacctgaagtctggcggcttcagcaccgacgcctgccgcagcatggtggccctcatggac
acatccatcactgggaagctgaacagtgaggaatttgtcagtttgtggaggaagattgtc
tcgtacaaggacatcttctctcactgcgacgtctctcagacggggacgctgtcgctcagc
gagctgaggaaggccatcatggcttcaggaaagacgatcagtgacggcatgctgaacatc
atggctctgcgctacggcgcctcctctggattcataacgctggagaacttcatcgctttg
gcccttcgatttgaccgcatgtaccaaatattcagagagttatctgatggaggagccgtg
actcttcgcgaaccagagtggatgaaccttgtgatatattcctaa

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