Xiphophorus hellerii (green swordtail): 116709276
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Entry
116709276 CDS
T07363
Name
(RefSeq) non-muscle caldesmon-like
KO
K12327
caldesmon
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
116709276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116709276
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
116709276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
116709276
NCBI-ProteinID:
XP_032403593
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Position
2:complement(31609004..31641975)
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AA seq
552 aa
AA seq
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MSHALLRRNSSKQGLQNLMRLTAQRSIEDAEEVERERRRKARESLRRRNSGSTPEDSSPE
SEALEERNTYDRELKPSSSPSLEEDEGFSDWTQRREKQRQQRLQELSQDGEEEEEEENVF
MKNNAANKAAHPASTPFSPVQRQDQEDTDSIRMKAERRNKYEEEVRRVKERGEMKKDKVL
LSTKQETQRSNTEEVKMKELKVSYTSKVFLCQKPKHNSQESGTARQEVTSVMNQKSRSSR
QFVESEEAKPFLEAEQRLERIRQSLQEKESQELEQIRHRQFEAEQELEELKTRRKERRRA
REEEERQREDEEKQQLAAEEEERRKMREDMERRRMEAAERMKSLSTSSAEGEEAFSPKVS
THKITERTNSLNRSLKKSNSFKKTQPPFLLTRIDDKMEQYTHAVEKTSQEPRALKVSLSD
LPNSPEVVASKKNLFEAGEAWSLNKGATCKDTGSLKVGVASLITHWVKGPSEPSSKQSPC
RPSDVRSGGVLQKKNMWEIYGDPPGRTEPKAKPAPHGKKHKFIVTGHGKYEKISVDECGD
LSQNAGLCYSDC
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgctctgctgaggaggaattccagcaaacagggtttgcaaaatctaatgaga
ctcaccgctcagaggagcattgaggatgctgaagaagtggagcgggaacgtcgccgaaag
gctcgagaatctttacgccgacggaacagcggctcaacacctgaagactcgtcaccagag
agcgaggcgctggaggagaggaacacgtatgatcgtgaactgaaacccagcagttcccct
tctcttgaggaggatgagggttttagtgactggactcagcgcagagaaaaacaaagacag
cagcgactgcaggagctcagtcaggatggagaagaagaggaagaagaagaaaatgtcttt
atgaagaacaatgcagccaataaggctgctcaccctgcttcgacaccgttcagtccagtt
caaagacaagatcaggaagatactgacagcatcaggatgaaggcagagaggaggaacaag
tatgaagaagaggttaggagagtgaaggagaggggggaaatgaagaaggacaaagtgctg
ctttccacaaaacaagagactcaaaggtcaaatacagaggaagtgaaaatgaaagaactt
aaagtatcctacacatccaaggttttcctgtgtcagaagccaaaacacaacagccaagag
agtggcacggcccgccaggaagtgacatcagtcatgaaccagaagagcagatctagcaga
caatttgtggagtcagaggaggcgaagcccttcctggaggcggagcagagactggagagg
attcgccagagcctgcaggagaaggagagtcaggagctggagcaaattagacataggcag
tttgaggccgagcaggagctggaagagctgaagacgagacggaaggagagacggcgagct
cgtgaggaagaggagcgccagagagaggatgaggagaagcagcagctggctgctgaggag
gaggaaagaagaaagatgagggaagacatggagaggaggaggatggaagcagcagaaagg
atgaagagcctcagtacgtccagtgcagaaggagaggaggcgttcagtcccaaagtttca
acacataagatcacagagagaaccaactccctgaaccgttcactaaagaaaagcaacagt
ttcaagaagactcagcctcccttcctcctgaccagaatcgatgataagatggagcagtac
actcacgctgtggagaaaacctcccaggagccgcgggcactgaaggtgtcgctctctgac
cttcccaattccccagaggtcgttgcctccaagaagaatctgtttgaggctggagaggcc
tggagcctgaacaaaggagcaacatgcaaggacactggcagtctgaaagtgggcgtggcc
agcctgatcacacactgggtaaaaggcccctcagagcccagcagcaaacagtcaccatgc
cgaccgtctgatgtgaggtctggaggcgtgctgcagaagaagaacatgtgggaaatatat
ggagacccaccagggaggaccgaaccgaaagcaaagccagcaccacatgggaaaaaacat
aaatttattgtcactggtcatggaaaatatgagaagatctctgtagatgaatgtggagac
ctcagccaaaatgccggtttgtgttacagtgattgctga
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