KEGG   Xiphophorus hellerii (green swordtail): 116709351
Entry
116709351         CDS       T07363                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116709351
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xhe01009]
    116709351
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xhe03021]
    116709351
Protein phosphatases and associated proteins [BR:xhe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116709351
Transcription machinery [BR:xhe03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     116709351
    Little elongation complex (LEC)
     116709351
SSDB
Motif
Pfam: ELL Occludin_ELL Seryl_tRNA_N A_deaminase_N
Other DBs
NCBI-GeneID: 116709351
NCBI-ProteinID: XP_032403716
LinkDB
Position
19:complement(18241605..18253282)
AA seq 623 aa
MSTLREKQCYGLSSGKLNLGGNVSVFHVKLTDSAARAIGTFQNGKSSSSCPTITFSGNQG
RIAVPCSENGNEARIFTFGVTNVARNSPHGSFDCVQQHDAGAAEELTCLGVIQKKMTVNA
TDDSYDKARQSMAQAEEETRSRGAIVIKNGARYQGRKVTVRAPAPALAKLTKPKHSSHSL
LNNIKRGVSLPRQRKGPCPVSRKSVGDIRERPLRERVMHLLALRPYKRPELILRLQKDGI
ADGDKDVLDAVMMEVGQLSNRDSTFVLKDGLYKELQKDWPGYTSGDQQLLKRILVRRLFQ
PQQNLLTVPEAQVSPLRETPNSSPAHRPKHSLLDEYADPLASKKPRISHLTSKSTSENFR
LRSSKQEAQKDAEATAEDGQNNSLNPKRLFDSLSAVCQQEAEVAKRLEQTDAPEEEPRDP
EEQQKPKSDHPSLPLMVPNLSRHTVKKKKSKHKDQEKEEWRDKKQRRKDKDCSSDYSNND
APLQCTETSKLMFDSNVPQVDTDSADYLSKYTAISSHNQRQSYKLDFNKEYSEYRDLHAR
IDSVTQQFMDLDTQLKQLHHESHKYKTVRNKILQEYRKIKKSNPNYNQDKVRCEYLHNKL
AHIKKLISDFDQQQITVDHSGPK
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgtcgactctgagggagaagcagtgttacggactgtccagcggtaaactgaacctcggc
ggcaacgtctctgtttttcacgtaaaactcactgacagcgcggcaagagccattggtacc
tttcaaaacggcaagagctcgtcttcctgtcctaccatcaccttcagtggaaatcaaggg
agaattgccgtaccttgctcagaaaatggaaatgaagcgaggatcttcaccttcggagtg
accaacgtcgctcgaaacagtccccacggtagctttgactgcgtccagcagcacgacgca
ggtgctgccgaggagctgacatgtctcggagtgattcagaagaagatgacagtcaacgcc
acagatgactcgtacgataaggctcgccagagcatggcccaggccgaggaggagacgcgc
agcagaggggccatcgtcatcaagaacggcgcacgctaccagggcaggaaggtgactgtg
cgagctccagctccagcgctggccaagctgaccaagcccaaacactcgtctcactccctc
ctcaacaacatcaagaggggggtcagcctgccaaggcagaggaagggtccctgtccagtg
agtaggaaaagtgtcggtgacattagggagcgacccctcagggagagagtgatgcacctg
ctggctctgaggccgtacaagaggcccgagctgatcctgaggctgcagaaagacgggatt
gcagacggagacaaagacgtgctggacgcagttatgatggaggtgggacagctcagtaac
agagacagcacatttgtcctgaaggacggcctgtacaaggagctgcagaaggactggcca
ggctacacctcaggggaccagcagctgctaaaacgaatccttgtcaggagacttttccaa
ccacagcagaacctcctcactgtccccgaggcccaggtcagccctcttcgggagaccccc
aactcatcacctgcacaccgcccaaaacactccctcctcgatgaatacgccgatcctctg
gccagcaagaagcccagaatatctcacctgacgagcaaatcaacgagtgagaatttcaga
ctgaggtcttctaaacaggaggctcagaaagacgccgaagcaacagcagaggacgggcaa
aacaactcgcttaaccccaaaagactttttgactcgctgtcagcagtttgtcagcaggaa
gcagaagtggctaaaagactggaacagacggatgctcctgaagaggaacctagagaccca
gaagagcaacagaaacccaagtcggatcacccctctctgcccctgatggtgcccaatctg
agcagacatacggtcaaaaagaagaagagcaaacacaaagatcaggagaaagaagaatgg
agagacaaaaagcaaaggagaaaagataaagattgcagttcagattattcaaataacgat
gctcctttgcaatgcacagagacgagtaagctaatgtttgactccaatgtacctcaagtt
gacactgactcagcagactatttatcgaagtacacggccatttccagccacaaccagaga
cagagctataaactggacttcaataaggagtacagcgagtacagagacttgcacgctcgc
atcgacagcgtcacgcagcagttcatggacctggacactcagctcaagcaacttcaccac
gagtcacacaaatacaagactgttcggaataaaatcctacaagagtaccggaaaattaaa
aaatccaatcccaactacaatcaagacaaagttcgctgtgaatatctacacaacaagctg
gctcacatcaagaagctcatatcagactttgatcagcagcagatcacagtggatcactcc
ggccccaaatga

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