Xiphophorus hellerii (green swordtail): 116709385
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Entry
116709385 CDS
T07363
Symbol
galc
Name
(RefSeq) galactocerebrosidase isoform X1
KO
K01202
galactosylceramidase [EC:
3.2.1.46
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00600
Sphingolipid metabolism
xhe01100
Metabolic pathways
xhe04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
116709385 (galc)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
116709385 (galc)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.46 galactosylceramidase
116709385 (galc)
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GFIT
Motif
Pfam:
Glyco_hydro_59
Glyco_hydro_59_C
Glyco_hydro_59M
Glyco_hydro_30
RNF216_N
Motif
Other DBs
NCBI-GeneID:
116709385
NCBI-ProteinID:
XP_032403769
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Position
19:complement(14375514..14386229)
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AA seq
668 aa
AA seq
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MDQRVFWVFASAVCLLSLTLHSSSGQTYPLTDEGGLGRVFDGIGGLSGGGATSRLLVNYA
EPYRSQILDYLFKPNFGASLHILKVEIGGDAQTTDGTEASHMHYENDENYFRGYEWWLMK
EAKKRNPNITLIALPWAFPGWVGRGKNWPYDFPDVTAAYVVNWVIGAKKYHDLDIQYIGI
WNERTFDSKYIKLLRYTLDKTGLESVRIVASDNLWEPITVSLMLDPELSSAVDVIGAHYP
GTTTVPQALTTKKKLWSSEDYSTFNNEVGGGCWARILNQNYVNGQMTATISWNLVASYYE
ELPFGRDGLMTAQEPWSGNYVVESPIWITAHSTQFTQPGWTYLQTVGHFAQGGSYVALTD
GYGNLTVVIETMTHDHSICIRPPLPPFNVTSQNATFQLKGSFASIKELQVWRSHFDFKAK
KHSLFEKLPPVKLVDGSFTLNLAEDEVYTLTTIRTGQKGSFPEPPPSARFPKAYKDNFDI
RNPPFSEAPNFADQTGVFEYYINLTDPGPHAFTLRQVVMERPITWATDADQTVTVIGDYQ
WQDMMVTCDVFMENLKSGGVFVAARVDKGGQSVRSAMGVFFWVFADGSYKVTNDLAGQSV
LAEGLSGTRPFDWHNLSLSVKGQSASGMVDGRQLWKVTGVSSPKNGWAAIGTHSFELAQF
DNFNVLAE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcgggtgttctgggtgtttgcctccgcagtgtgcctcctctccctcaccctg
cactcttcgtccgggcagacctacccgctgactgatgaggggggtctgggcagagtgttt
gacgggatcggagggttgagcggtggaggggccacatcccggttacttgtgaactacgct
gagccgtaccggagccagatcctggactacctgtttaagccaaactttggagcctctttg
cacattctgaaggtggagatcggaggagatgctcagactacagatggaacggaggcttca
cacatgcactatgagaacgacgagaactacttcagaggctacgagtggtggctgatgaag
gaggccaagaagaggaacccgaacataactctaatagcgttaccctgggcgttccccggc
tgggtcggccgtgggaagaactggccttatgacttcccagatgttactgcagcgtacgtt
gtgaactgggtcataggagccaagaaataccacgacttggacattcagtatattgggatt
tggaatgagcggacgttcgactcaaagtacatcaagctgctgcggtacactctggacaag
actggtttggagtcggttcggatcgtagccagcgataacctgtgggagcccattaccgtg
tcgctgatgctcgacccagagctcagcagcgccgtagatgtgataggggctcactaccca
ggaactaccacagtgccgcaggccttgaccacaaagaaaaagctgtggtcatcggaggac
tacagcaccttcaacaatgaggtgggaggaggctgctgggcgcggatcctcaaccagaac
tacgtcaatggacaaatgactgcaaccatctcctggaacctggtggccagttattacgag
gagctgccgttcggcagagacgggctgatgacagctcaggaaccttggagtggaaactac
gtggtggagtctccgatctggatcacagcccacagcacacagttcactcagcctggatgg
acatacctgcagactgttggacactttgctcagggaggaagttatgtggccctgacagac
gggtatggaaacctgactgttgtcatagaaaccatgactcatgatcactccatctgcatt
agacctcctctccctcccttcaatgtcacgtcccagaatgcaacatttcagctgaaaggg
tcctttgcctccatcaaagagctgcaggtgtggaggtcgcactttgacttcaaggcgaag
aagcactcgctgttcgagaagctgcctcctgtgaagcttgtagatggatcatttactctg
aatctggctgaagatgaagtttatactctgaccaccatccggaccggacagaaagggagc
ttccctgagccgccaccttcagcccgcttccctaaagcctacaaggacaactttgatatt
cgaaaccctccgttttctgaggcccctaacttcgccgaccaaaccggtgtgtttgagtac
tacattaacctgactgaccccggaccacatgccttcacgctacggcaggtggtgatggaa
agaccgatcacctgggcaacggacgccgatcaaaccgtcactgtcatcggagactatcag
tggcaggacatgatggttacctgcgatgtatttatggagaacctaaaaagcggcggtgtg
ttcgtggcagcccgggtggataaagggggccagtcggtacgcagcgctatgggagtcttc
ttctgggtgtttgccgatggatcgtacaaggttaccaatgatctggctggacagtcggtg
ctggcagagggactgtcaggaacaagaccttttgattggcacaacttgtccctttctgta
aagggtcagagcgcctccggaatggtggacgggcggcagctgtggaaagtcactggagtt
tcttcaccgaagaacggctgggcagcaatcggaacgcactcgtttgaactggctcagttt
gataactttaatgtgttggcagagtaa
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