KEGG   Xiphophorus hellerii (green swordtail): 116709394
Entry
116709394         CDS       T07363                                 
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03082  ATP-dependent chromatin remodeling
xhe03083  Polycomb repressive complex
xhe04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116709394
   03083 Polycomb repressive complex
    116709394
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    116709394
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xhe03036]
    116709394
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     116709394
  Histone modification proteins
   HAT complexes
    HATB complex
     116709394
   HDAC complexes
    Sin3A-HDAC complex
     116709394
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     116709394
    PRC2.2
     116709394
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     116709394
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    116709394
  Chromatin remodeling factors
   NuRD complex
    116709394
   NuRF complex
    116709394
   NuRF complex (fruit fly)
    116709394
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 116709394
NCBI-ProteinID: XP_032403786
LinkDB
Position
19:complement(10455138..10460094)
AA seq 424 aa
MADKDAAFDDAVEERVINEEYKIWKKNTLFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFEASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADS
EVQA
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggccgataaagacgctgcatttgatgatgccgtggaggaaagggtgatcaatgaggag
tacaagatctggaagaagaacacccttttcctctatgatctggtcatgactcacgccctg
gagtggcccagcctgaccgctcagtggctgccagatgtcaccagacctgagggaaaggac
tacagtgtacatagactggttttggggacacacacctctgacgagcagaatcaccttgtt
attgccagtgttcaacttccaaatgatgatgcccaatttgaggcttcacactatgacagt
gagaaaggagagtttggaggctttggctctgttagtggaaaaatagagattgagatcaag
atcaaccatgagggagaagtgaacagagcacgctatatgccccagaatccctgtattatt
gccaccaaaacccccaccagtgatgtgctggtctttgattacacaaagcacccctccaaa
cctgatccttctggagaatgcaccccagacctgcgactcaggggacaccagaaggaaggc
tacggcctctcctggaacccaaacctcagtggatgcctcctcagtgcttctgatgaccat
actatatgcctctgggatatcagcacggtgccaaaggaggggaagatcgtagatgccaaa
acaatcttcacaggccacactgctgtggtggaggacgtttcctggcatcttctccacgaa
tccctcttcggatctgtggcagacgaccagaaactcatgatctgggacacacggtcaaac
aacacctccaaaccgagccatgcagtggacgctcacactgctgaagtcaactgcctgtct
tttaatccctacagtgagttcattttggccactggctctgctgacaagactgtggctctt
tgggacttgaggaacctgaagctgaaactccattcatttgagtctcacaaggatgagatc
tttcaggttcagtggtctcctcataatgagaccatcctggcctccagcggcaccgacagg
cggctcaacgtctgggacctgagtaagatcggagaggagcagtcgccagaggacgctgag
gatggtcctcccgagttgctgttcatccatggcggacacacagctaagatctcagacttt
tcctggaaccccaacgagccgtgggtcatctgttcggtgtcagaggacaacatcatgcaa
gtgtggcagatggctgaaaacatctacaacgatgaagacccagagggcgctgcagattca
gaggtccaggcatga

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