KEGG   Xiphophorus hellerii (green swordtail): 116709417
Entry
116709417         CDS       T07363                                 
Name
(RefSeq) protein quaking-A isoform X1
  KO
K14945  protein quaking
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xhe03041]
    116709417
Spliceosome [BR:xhe03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    116709417
SSDB
Motif
Pfam: STAR_dimer Quaking_NLS KH-I_KHDC4-BBP KH_1 KH_12 KH_KRR1_2nd KH_FAR1_2nd KH_PNO1_2nd
Other DBs
NCBI-GeneID: 116709417
NCBI-ProteinID: XP_032403821
LinkDB
Position
19:complement(4693157..4781112)
AA seq 392 aa
MMVGEVEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRVRKDMYSD
TVNGLVDRHPLELPEPIGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGC
KIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQNRAEIKMRRAVEEVKKLL
VPAAEGEDNLKKMQLMELAILNGTYRDNNVKTPPLAFSLAAAAAAAQGPRLIAAPAGQVL
PPQALRPPTPAGTPIMNLIRPTQMAAMLPNGTPTLVPPTPDGGLIYTTPYEYPYALAPTS
LLEYPIEHSGVLGKRAWGSLGTAANFSQPGQEGSLFYPGVGVLDAATMSHSQDLLKGAMA
TKVRRHDTRVHPYQRIVTADRGQFSLLATFCY
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgatggtcggagaggtcgaagtgaaggaacgaccgaggccgagtccggactatttgatg
caattattaaacgaaaagaagctcatgaccagtttgccaaatctctgcgggatcttcacg
cacctggagcggctcctggatgaagagatcaacagagtgcgtaaagatatgtacagcgac
acagtgaacggccttgtggacagacacccgctggagctgcccgaacccatcggacccatc
gttcacctgcaggagaaactgtttgtgcctgtcaaagagtacccagactataactttgtg
ggaagaatcctcggtccccggggactcactgccaaacagttggaagcagagacgggatgc
aaaattatggtgcgaggaaagagctccatgagagacaagaagaaggaggagcagaacaga
gggaagccaaactgggaacacctaaatgaagaccttcacgtcctaatcaccgttgaagac
acacaaaacagagcagagatcaagatgaggagagcagtagaggaagtcaagaagctcctc
gtgcctgctgctgagggtgaagacaatttgaagaagatgcagctgatggagctggctatt
ctcaacgggacatacagagacaacaatgtcaaaacacccccccttgcgttctctcttgca
gcagcggcggcggccgctcagggcccccgcctcatagcggcccccgcgggtcaggtgttg
cctccccaggcactccggcccccaacgccggccgggacccccatcatgaacctcatccgg
cccactcagatggccgctatgctgcccaacggcacccccaccttggtgcctcccacacca
gacggcggactaatctacaccaccccttacgagtacccctacgccttggcacccacctcg
ctgctggagtaccccatcgagcacagtggggttctaggtaagagagcctgggggagcttg
ggtacagcggccaactttagccagcctggacaggagggcagcttgttttaccccggagtc
ggggtgctggacgcagctaccatgagccacagtcaggacttgttgaaaggtgcaatggct
actaaagtgagacggcatgacacgcgggtccatccttaccaaaggattgtgaccgctgac
agaggtcagtttagtctcctagctacattttgctattga

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