Xiphophorus hellerii (green swordtail): 116709417
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Entry
116709417 CDS
T07363
Name
(RefSeq) protein quaking-A isoform X1
KO
K14945
protein quaking
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116709417
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116709417
SSDB
Ortholog
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GFIT
Motif
Pfam:
STAR_dimer
Quaking_NLS
KH-I_KHDC4-BBP
KH_1
KH_12
KH_KRR1_2nd
KH_FAR1_2nd
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
116709417
NCBI-ProteinID:
XP_032403821
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Position
19:complement(4693157..4781112)
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AA seq
392 aa
AA seq
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MMVGEVEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRVRKDMYSD
TVNGLVDRHPLELPEPIGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGC
KIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQNRAEIKMRRAVEEVKKLL
VPAAEGEDNLKKMQLMELAILNGTYRDNNVKTPPLAFSLAAAAAAAQGPRLIAAPAGQVL
PPQALRPPTPAGTPIMNLIRPTQMAAMLPNGTPTLVPPTPDGGLIYTTPYEYPYALAPTS
LLEYPIEHSGVLGKRAWGSLGTAANFSQPGQEGSLFYPGVGVLDAATMSHSQDLLKGAMA
TKVRRHDTRVHPYQRIVTADRGQFSLLATFCY
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcggagaggtcgaagtgaaggaacgaccgaggccgagtccggactatttgatg
caattattaaacgaaaagaagctcatgaccagtttgccaaatctctgcgggatcttcacg
cacctggagcggctcctggatgaagagatcaacagagtgcgtaaagatatgtacagcgac
acagtgaacggccttgtggacagacacccgctggagctgcccgaacccatcggacccatc
gttcacctgcaggagaaactgtttgtgcctgtcaaagagtacccagactataactttgtg
ggaagaatcctcggtccccggggactcactgccaaacagttggaagcagagacgggatgc
aaaattatggtgcgaggaaagagctccatgagagacaagaagaaggaggagcagaacaga
gggaagccaaactgggaacacctaaatgaagaccttcacgtcctaatcaccgttgaagac
acacaaaacagagcagagatcaagatgaggagagcagtagaggaagtcaagaagctcctc
gtgcctgctgctgagggtgaagacaatttgaagaagatgcagctgatggagctggctatt
ctcaacgggacatacagagacaacaatgtcaaaacacccccccttgcgttctctcttgca
gcagcggcggcggccgctcagggcccccgcctcatagcggcccccgcgggtcaggtgttg
cctccccaggcactccggcccccaacgccggccgggacccccatcatgaacctcatccgg
cccactcagatggccgctatgctgcccaacggcacccccaccttggtgcctcccacacca
gacggcggactaatctacaccaccccttacgagtacccctacgccttggcacccacctcg
ctgctggagtaccccatcgagcacagtggggttctaggtaagagagcctgggggagcttg
ggtacagcggccaactttagccagcctggacaggagggcagcttgttttaccccggagtc
ggggtgctggacgcagctaccatgagccacagtcaggacttgttgaaaggtgcaatggct
actaaagtgagacggcatgacacgcgggtccatccttaccaaaggattgtgaccgctgac
agaggtcagtttagtctcctagctacattttgctattga
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