Xiphophorus hellerii (green swordtail): 116709419
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Entry
116709419 CDS
T07363
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04020
Calcium signaling pathway
xhe04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116709419 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116709419 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xhe04030
]
116709419 (ptafr)
G protein-coupled receptors [BR:
xhe04030
]
Rhodopsin family
Others
Platelet activating factor
116709419 (ptafr)
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Ortholog
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GFIT
Motif
Pfam:
7tm_1
CitMHS
7TM_GPCR_Srx
Serpentine_r_xa
7TM_GPCR_Srd
Motif
Other DBs
NCBI-GeneID:
116709419
NCBI-ProteinID:
XP_032403827
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Position
19:complement(5049765..5059703)
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AA seq
374 aa
AA seq
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MGTETSSTFLDSEFRYMLFPVVYSIIFIVGFFSNLYVLFVLRCLREAKAMGEIRIYMTNL
TIADLLFVCSLPFWIGYYRRKGDWVFQDFMCQLAGSLFFINTYGTILFLGAISLNRYWAV
SRPLDAASSDHRRRGIIVCVVIWAFTILLSIPSFTSPGTNDDGNVTRCFEGYHNQTEDEK
RKVATTHFVIIAMFFVVFFLVVVCNFLIARNLLSQSTPQSVAFSDTIKSNRTLTSTFKRP
NKARGVKRRALQLLLAVVGVFVLCFMPHHVVQGPWVLAVLDIKEGWGHINWSQDTRQALN
DAHQITLVLMGVNCILDPVVYFFATRKFRRFIVEHIKKLSRGEACSHSANIQLSMDSRNH
SQKLPSIQPQPGEE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagagaccagctcgacctttctggattcggagtttcgctacatgctcttccca
gttgtgtacagcatcatctttattgtgggcttcttctccaatctttatgtgctgtttgtt
ctgcggtgtctccgtgaagcaaaggccatgggagaaatacgcatctacatgaccaacctg
accatcgctgacctcctttttgtttgttcgctacccttctggattgggtactacaggcgt
aagggggattgggtcttccaggatttcatgtgccagctggcaggatcgttatttttcatc
aacacttacggcaccatcctgttcctcggagcgatcagcctcaaccggtactgggcggtc
tctcggcctttggacgcagcctcgtcggatcacaggcggcgtgggatcatcgtatgtgtc
gtaatctgggcgtttaccattttattgtcaatcccctccttcacatcaccgggtaccaac
gatgatggaaatgtaactcgatgcttcgaggggtaccacaatcaaacggaggacgagaag
aggaaagtggcaactacgcatttcgtaataatcgcgatgttttttgttgtgttttttctt
gttgtcgtgtgcaatttccttattgcccgaaacttactttctcagagtacacctcagtca
gtggctttctctgacacaatcaagtccaacaggacgcttacgtctacgtttaaaaggccc
aataaggccagaggggtgaagaggagggctctccagctgctcctggcggtggtgggggtg
ttcgtgttgtgctttatgccccaccacgtcgtccagggcccctgggtgctggctgtgctg
gatataaaggagggctggggccacataaactggagccaggacacacggcaggcactcaac
gacgcccatcagatcactttggttctgatgggcgtcaactgtatcctggatcctgtggtg
tatttctttgccacaaggaagttcaggagattcattgtggagcacatcaaaaagttatct
agaggggaggcttgctcccactcagcgaacatccaactatccatggacagcaggaaccac
agccagaaacttccgagtatccagccacagccgggtgaggaataa
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