Xiphophorus hellerii (green swordtail): 116709441
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Entry
116709441 CDS
T07363
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116709441 (irf2bpl)
04121 Ubiquitin system [BR:
xhe04121
]
116709441 (irf2bpl)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116709441 (irf2bpl)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Atypical E3
116709441 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
116709441
NCBI-ProteinID:
XP_032403855
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All DBs
Position
19:complement(26498312..26504367)
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AA seq
673 aa
AA seq
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MSSPQVSSSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARHLKRA
QGFQDSRSSASGLPAQQQSAAAKSQAVLLSGKEPLGQLNHYQADGQGKSQQPSLDRYAQV
ADSRARFDYSVHSCSSRPPNGFGGLNGFKTDDGPPELNRQSPNSRCKSNGGLVSAPAQMT
VPPNLMPQTGMNGPTSHSLAGRPPASSMVVVSLPGQVGHSELGGKRPASVSSTDQEREMK
EKQRNAEALTELSESLRNRQEDWASKPKPVRETLVLLSGCTPFDVRFKKDHGLVGRVFAF
DAVSKTGMDYELKIFIEYPCGSGNVFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKK
HGSGDWRLLGDLLPESLRFFKEAVGEDMLPQPYIDGSCPLLPTSLVLPGRASASGSGSST
TRAGARKRKASPEPDSAEGSLKLTDEQQRQQWINSQAEALKLSMAAGSFAGPPPPLTPGH
PGVSSGRTTPPDAAAPQNRQSPMAALLSVADTLGNAYSPNKDRDSVHSTTSSSRHNSSSP
VSPPSVSGQRRLSSRTGDTGLSAASQSAGAMDQLPSQSVPDSPMANSGPLCCTICHERLE
DTHFVQCPSVPSHKFCFPCSRESIKAQGASGEVYCPSGDKCPLLGSNVPWAFMQGEIATI
LAGDVKVKKERDP
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccgcaggtctcctcatcccgcagacagtcgtgctatttatgcgacctgccc
cgcatgccctgggccatgatatgggacttcaccgagcccgtgtgtcggggctgcgttaac
tacgagggcgcggaccggatcgagttcgtcatcgagacggcccgccatctgaagcgggct
cagggcttccaggacagccggtcctctgcaagcggactgcccgcgcagcagcagtccgct
gccgcgaagagccaggcggttttactgagtgggaaggaacctctggggcagctgaaccac
taccaggcggatggacaagggaagtctcagcagcccagtttggaccgatacgcacaggta
gcggacagccgggctcggtttgactactcggtgcacagctgcagcagcagaccgcctaat
ggattcggagggctgaacggctttaaaacagatgacggaccacctgagctgaaccggcag
agtccaaactcccggtgcaaaagcaacggtgggctggtgtcagcaccagcccagatgacc
gtaccgccgaacctcatgcctcagaccggaatgaacggaccgacttcgcatagcttggcg
ggcagaccccctgccagctccatggtggtcgtctctctgcccggccaggtgggacactcc
gagctgggtggaaagcgacccgcctccgtgtcgagcacagaccaggagcgggaaatgaag
gagaagcagcggaacgcggaggctctgactgagcttagcgagagcctgcggaaccgacaa
gaagattgggcaagcaagccgaaacctgtgcgggaaacgcttgtcctcctctccgggtgc
acaccgtttgatgtccgcttcaagaaggaccacggtctggtcggcagggtgttcgctttc
gacgctgtgtccaaaaccgggatggactatgagcttaaaatatttattgagtacccatgc
ggctccgggaacgtgttctccagcgcctcgggggtcgccaagcagatgtatcaggactgc
atgaaggacttcggcagaggcctgtcttctgggtttaagtatctggagtacgaaaagaaa
cacgggtccggggactggcgccttctcggagacttattaccggagtctttgcggtttttt
aaagaggcagtgggggaggatatgctgccgcagccttacatcgacggcagctgcccgctg
ctgccaacatcactggttcttccaggtcgagcttcggcttctggcagtgggagtagcacc
accagggccggggcgaggaagagaaaagcctccccggagccggactctgctgagggcagc
ctgaagttgacggatgagcagcaaaggcagcagtggatcaacagccaggctgaagctctc
aaactctcgatggctgcgggctcgtttgctgggcctccacccccgctgaccccggggcac
cccggtgtctcctccggccgcaccacacctccagatgccgcggcacctcagaacaggcag
tccccgatggctgcgcttttgtcagtggcagacacgctggggaacgcgtactctcccaac
aaagacagagactctgttcactccaccacttcctcgtctagacacaatagcagcagccca
gtatctcccccctccgtgtccggccagaggcgcctctcctcacggactggagacaccggg
ctgtccgcagcgtcgcagtccgccggtgccatggaccagctcccgtctcagagcgtgccc
gattcaccgatggccaacagcggacctttgtgctgcactatctgccacgaacgcttagag
gacacgcattttgtccaatgtccctccgtccctagccacaagttttgcttcccgtgctcc
agagagagcatcaaggcccagggggcgtctggggaggtgtactgccccagcggggacaaa
tgtcccttgttgggctccaacgtgccctgggcttttatgcagggggaaatcgcaaccatc
ctggctggagatgtgaaggttaagaaggagagggacccgtga
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